Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03340 ATGAAGGAGGACGCGGAGAACGATAAAGACAAAGACGCGAGGATTTGGGGAGCTTTACTCTTCGGCTTAATTGGCGCCACCGTCACTACCTTTGCGGTCGGTCCGCTGCGGAGAAGTGTTGATTGGTTCTGTGTTCAGCTATCGAGGACACAGTCACATAAAGGACAGAGAGGTGGGTCGTTCCGAACATCATTTCAAGAAGAGGCGTGGAGGAGGCACAATAAGCGACTGCAAGAGGAGTACGAGGAGGAGATGGAAAGAGTGGAACGAATAAGGCGTATGCAAAGCGTGTTTAACAGAGAAAGGAACAAGTATAAAAGAAGCTACGAGAGCTGGAGGGAAAACGGTCAGGGTGCATATCATCAGCATTTCCAGAGAGAAGATTGGTACTGGAAGACTGATACATCCTTTAGAGATCGGAGGACCAATTATCGAGAACCTCCAAGAGAGACCGGAAACTATGCATTATCACATCACTACTCAAATTTGGGTCTTGACAGGTTTAGAAAAACGCCGTATTCAGATGCTGAGATTAAGACAGCATTTAGAACTAAGGCAAAGGAGTATCATCCTGATCAAAACCAGGATAATATTGAGGCTGCTGAGGCGAAGTTCAAGGAAGTGTTGACTTCATACGAGGCCATAAAAAAGGAAAGAAGAAACTAA 666 0.4565 MKEDAENDKDKDARIWGALLFGLIGATVTTFAVGPLRRSVDWFCVQLSRTQSHKGQRGGSFRTSFQEEAWRRHNKRLQEEYEEEMERVERIRRMQSVFNRERNKYKRSYESWRENGQGAYHQHFQREDWYWKTDTSFRDRRTNYREPPRETGNYALSHHYSNLGLDRFRKTPYSDAEIKTAFRTKAKEYHPDQNQDNIEAAEAKFKEVLTSYEAIKKERRN 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03340 221 CDD DnaJ 159 213 IPR001623 -
Viun9g03340 221 SMART dnaj_3 157 220 IPR001623 -
Viun9g03340 221 Coils Coil 198 218 - -
Viun9g03340 221 SUPERFAMILY Chaperone J-domain 155 218 IPR036869 -
Viun9g03340 221 Gene3D DnaJ domain 153 221 IPR036869 -
Viun9g03340 221 ProSiteProfiles dnaJ domain profile. 158 220 IPR001623 -
Viun9g03340 221 Pfam DnaJ domain 159 219 IPR001623 -
Viun9g03340 221 Coils Coil 67 94 - -
Viun9g03340 221 PRINTS DnaJ domain signature 182 197 IPR001623 -
Viun9g03340 221 PRINTS DnaJ domain signature 200 220 IPR001623 -
Viun9g03340 221 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03340 Viun-Chr9 40046978 40052409 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03340 - - gmx:100812371 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03340 9 40046978 40052409 Viun9g03340 9 40046978 40052409 ECH
Viun8g00445 8 3173198 3178351 Viun9g03340 9 40046978 40052409 PCT