Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00474 ATGGCCACCACCACTTCTCTTCCCACGTTCTTCCTTCTCCTCCTCGCAACCGTCGCTCTTGTTGCTGCTCGCCGTGACCTCGTCGGAGACTTCCTCCGACTGCCGTCCGATTCCGGTAGCGATGACAACTTCCAGGGGACGCGCTGGGCCATCCTCTTCGCCGGTTCGAACGGCTATTGGAACTACAGACATCAGGCCGATATTTGTCATGCCTATCAAATACTGAGGAAAGGTGGCCTGAAAGAAGAAAATATCATTGTTTTTATGTACGATGACATTGCCTTCAATTGGGACAACCCAAGGCCAGGAGTCATCATTAACAAACCAGATGGGGATGATGTTTATGAAGGAGTTCCAAAGGATTACACTGGCGAAGATGCTACTGCTCATAACTTTTATGCTGCTTTACTTGGAGATAAGTCGGCGCTTAAAGGTGGCAGTGGGAAGGTTGTGAACAGTGGGCCCGATGATCGCATATTTATATTCTACTCCGATCATGGTGGTCCAGGGGTTCTCGGGACGCCTGCTGGTCCTTACTTATATGCATCTGATCTAGTTGAAACATTGAAGAAAAAGCATGCTTCTGGAACGTACAAAAACCTAGTATTTTATTTGGAGGCATGTGAAGCTGGAAGTATTTTTGAAGGTCTTCTTCCTGAAGATATCAATATTTATGCAACAACGGCTTCGAATGCCGAAGAAAGTAGTTGGGGAACATATTGTCCTGGGGAGTATCCTAGTCCTCCCCCAGAATATTCAACCTGCTTGGGTGACCTGTACAGTATTGCTTGGATGGAAGACAGTGATAGACACAATTTGCGAACAGAATCTTTGCACCAACAATATAAAGTGGTTAAAGATAGGACTCTGTCTGGAGGTTACTATGGCTCTCACGTGATGCAGTATGGTGATGTAGGGCTTAGCAAGGATTCTCTCTTCCTGTATTTGGGTACAGATCCTGCAAATGATAATTTGACTTTCGTGGATGAAAACTCCTTACGGGCATCTTCAACAGCAGTCAACCAAAGAGATGCTGATCTCGTCCATTTTTGGCATAAGTTCCGCAAAGCTCCGGAGGGTTCTCCTAAGAAAAATGAAGCACGGAAACAAGTTCTGGAAGTAATGTCTCACAGAATGCATATAGACGACAGTGTGAAACTTGTTGGAAAGCTTTTATTTGGCATTGAAAAGGCTCCTGAAGTACTGAATGCTGTTAGACCGGCTGGATCAGCACTTGTTGATGACTGGGAGTGCCTGAAAACCATGGTAAGGACTTTTGAGACACATTGTGGATCCTTGTCTCAGTATGGGATGAAACACATGAGGTCCTTTGCCAACATCTGCAATGTAGGAATAAAGAAGGAGCAAATGGGTGAAGCCTCAGCACAAGCTTGTGTGAGTATTCCTGACAGTCCCTGGAGTTCTCTGCAAAGGGGTTTCAGTGCATAA 1449 0.4562 MATTTSLPTFFLLLLATVALVAARRDLVGDFLRLPSDSGSDDNFQGTRWAILFAGSNGYWNYRHQADICHAYQILRKGGLKEENIIVFMYDDIAFNWDNPRPGVIINKPDGDDVYEGVPKDYTGEDATAHNFYAALLGDKSALKGGSGKVVNSGPDDRIFIFYSDHGGPGVLGTPAGPYLYASDLVETLKKKHASGTYKNLVFYLEACEAGSIFEGLLPEDINIYATTASNAEESSWGTYCPGEYPSPPPEYSTCLGDLYSIAWMEDSDRHNLRTESLHQQYKVVKDRTLSGGYYGSHVMQYGDVGLSKDSLFLYLGTDPANDNLTFVDENSLRASSTAVNQRDADLVHFWHKFRKAPEGSPKKNEARKQVLEVMSHRMHIDDSVKLVGKLLFGIEKAPEVLNAVRPAGSALVDDWECLKTMVRTFETHCGSLSQYGMKHMRSFANICNVGIKKEQMGEASAQACVSIPDSPWSSLQRGFSA 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00474 482 PANTHER HEMOGLOBINASE FAMILY MEMBER 23 466 IPR001096 GO:0006508|GO:0008233
Viun8g00474 482 FunFam Vacuolar-processing enzyme beta-isozyme 46 341 - -
Viun8g00474 482 PIRSF Legumain 3 482 IPR001096 GO:0006508|GO:0008233
Viun8g00474 482 PRINTS Hemoglobinase (C13) cysteine protease signature 49 73 IPR001096 GO:0006508|GO:0008233
Viun8g00474 482 PRINTS Hemoglobinase (C13) cysteine protease signature 121 136 IPR001096 GO:0006508|GO:0008233
Viun8g00474 482 PRINTS Hemoglobinase (C13) cysteine protease signature 198 214 IPR001096 GO:0006508|GO:0008233
Viun8g00474 482 PRINTS Hemoglobinase (C13) cysteine protease signature 74 103 IPR001096 GO:0006508|GO:0008233
Viun8g00474 482 PRINTS Hemoglobinase (C13) cysteine protease signature 149 168 IPR001096 GO:0006508|GO:0008233
Viun8g00474 482 Pfam Peptidase C13 family 48 317 IPR001096 GO:0006508|GO:0008233
Viun8g00474 482 Gene3D - 46 341 - -
Viun8g00474 482 FunFam Vacuolar-processing enzyme beta-isozyme 342 470 - -
Viun8g00474 482 Gene3D - 342 469 IPR046427 -
Viun8g00474 482 CDD legumain_C 344 465 - -
Viun8g00474 482 PIRSF AE 2 482 IPR043577 GO:0004197|GO:0051603
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00474 Viun-Chr8 3471996 3478777 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00474 K01369 - gmx:547700 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00474 8 3471996 3478777 Viun8g00474 8 3471996 3478777 ECH