Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00458 ATGGATTTCATGAAGGTCTTCGATCAAACCGTTCGAGAAATAAAGAGAGAGGTGAATCTGAAGGTGCTTAAGGTTCCGGAAATCGAACAGAAGGTGCTCGATGCAACTGATAATGAACCTTGGGGTCCTCATGGTACTGCACTGGCAGAGATTGCACAGGCTACCAAAAAATTTACTGAATGTCAAATGGTCATGAATGTCCTTTGGACAAGACTGGGCGAAACTGGAAAAGACTGGAGATATGTATACAAGGCGTTGGCGGTTATTGAGTATTTGGTAGGAAATGGATCTGAACGTGCAGTTGATGACATTATAGAACATACTTTTCAGATTTCAGCACTTGCTAGTTTTGAATATGTTGAGCCAAGTGGGAAGGACGTGGGACTCAATGTAAGGAAGAAGGCTGAAACCATTGTGTCCCTTTTGAATGATAGGGATAAGATACATGATGTCAGAAATAAAGCTTCTGCAAACCGTGACAAGTATATTGGAGTTTCTTCTAGTGGTATTACATACAAGTCTGGTGGGTCAGCCTCTTATAGTAGTGGTGGCTTCTCTCAGAGCAGTGGTAAGTATGGAGGCTTTGGATCTAGAGATGGTGACAGGTTTAGTGATAGCAATAGAGACAAGGGGGGATCTTATGATGACCATGGAAAATCAAACCATACTGTTGCAAGTGACAATCAAGACAACTCCTTCAAGAAGGGTTCATCACGATCTGTCAGCAAAAGTCCAGAGAACAAGTCATCTAGAGTATCAAAGTCATCAACTAATGCAAATAATTATGGTTCAGTTCCTTCTCAGAGTTCAAGTGTACCTGGAAATAGTACTGAGGATGACATGGATGATTTTAATCCAAGAGGAACTTCTACCAAAACTTCGCCAGGAAACTCTAACCAAGTTGATCTCTTTGGACAAGATTTAATTGGTGACTTCATGGATGCTCCCACATCTGTTCCTGTAGAGAAGCCAGCAACTGGTAATTTGCCAGAGGTTGATCTTTTTGCAGATGCATCATTTGTATCTGCAACACCTCAAATGGACAAAGGAGCCAGTTCTCAACCACAGGCTGAGGTGGATCTATTTGCTTCACAACCCGCAATTTCTACAGTTACACCAACAGCTGACTTGTTTTCCATTGCTGAACCAGTAGTGCAGCCAGACAGCAAGCCAGAGAAATCTGGTCCTGTGGATAACAGCTCGTTTGATCCGTTTGCTGCTGTTCCACTTAATAATTTTGATGGATCTGATATTTTTGGTGATTTTACTTCTCAATCTGATTCTGTGTCTTCCCAGCCCTCCAATAATGTTGTCAGGGATGACAAACATGATAACATCACTGGTAAAACTTTAGCAGACACTAAAGTTCCTTCTAAAAAGGATACTTTCCAGGTGAAGTCTGGTGTCTGGGCTGATTCACTAAGCCGCGGACTGATCGATCTCAATATAACTGCCCCTAAAAAAGTATCCCTTGCGGATGTTGGGATTGTGGGTGACTTGAGCGATGGATCGGAGGGAAAGGAGAAAGGGCCTCCACCTTCATTTTATATGGGGAGAGCTATGGGTTCAGGTTTAGGTTCAGGTTCAGGAAGTATTGGACTTGGTAGGTCTGGATTCACTCCTTCACAACCAGCACCTGCAGACGACATATTCTCAAGCCTTGGCTCCCAACAATATCAATTCGGTGCGTTCCAGAAGTAA 1701 0.4292 MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDNEPWGPHGTALAEIAQATKKFTECQMVMNVLWTRLGETGKDWRYVYKALAVIEYLVGNGSERAVDDIIEHTFQISALASFEYVEPSGKDVGLNVRKKAETIVSLLNDRDKIHDVRNKASANRDKYIGVSSSGITYKSGGSASYSSGGFSQSSGKYGGFGSRDGDRFSDSNRDKGGSYDDHGKSNHTVASDNQDNSFKKGSSRSVSKSPENKSSRVSKSSTNANNYGSVPSQSSSVPGNSTEDDMDDFNPRGTSTKTSPGNSNQVDLFGQDLIGDFMDAPTSVPVEKPATGNLPEVDLFADASFVSATPQMDKGASSQPQAEVDLFASQPAISTVTPTADLFSIAEPVVQPDSKPEKSGPVDNSSFDPFAAVPLNNFDGSDIFGDFTSQSDSVSSQPSNNVVRDDKHDNITGKTLADTKVPSKKDTFQVKSGVWADSLSRGLIDLNITAPKKVSLADVGIVGDLSDGSEGKEKGPPPSFYMGRAMGSGLGSGSGSIGLGRSGFTPSQPAPADDIFSSLGSQQYQFGAFQK 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00458 566 MobiDBLite consensus disorder prediction 500 551 - -
Viun8g00458 566 SUPERFAMILY ENTH/VHS domain 7 152 IPR008942 -
Viun8g00458 566 PANTHER EPSIN/ENT-RELATED 4 529 - -
Viun8g00458 566 MobiDBLite consensus disorder prediction 175 300 - -
Viun8g00458 566 MobiDBLite consensus disorder prediction 424 443 - -
Viun8g00458 566 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
Viun8g00458 566 Gene3D - 19 165 IPR008942 -
Viun8g00458 566 MobiDBLite consensus disorder prediction 201 223 - -
Viun8g00458 566 MobiDBLite consensus disorder prediction 175 193 - -
Viun8g00458 566 SMART enth_2 26 152 IPR013809 -
Viun8g00458 566 Pfam ENTH domain 27 147 IPR013809 -
Viun8g00458 566 CDD ENTH 28 144 - -
Viun8g00458 566 MobiDBLite consensus disorder prediction 224 278 - -
Viun8g00458 566 FunFam Clathrin interactor 1 18 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00458 Viun-Chr8 3366316 3374180 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00458 K12471 - gmx:100809198 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00458 8 3366316 3374180 Viun8g00458 8 3366316 3374180 ECH