Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00447 ATGGACATCAATGCTCTTCTAACTTCTGCTGGAATTAATATTGGTCTGTGTGTGGTGCTCTTTTCATTTTATTCCGTATTAAGAAAACAACCCAGCAATGTTAACGTGTACTTTGGAAGGAGACTAGCCTCTCAGCATTCAAGACGCGTTGATCTCTGCTTAGAAAGATTTGTTCCCTCCCCTAGCTGGATACTGAAAGCATGGGAAACGTCTGAGGAAGAGATACTAGCTATTGGTGGCTTGGATGGTGTGGTTTTTGTGAGGATGCTTGTGTTCAGTATCCGAGTGTTTTCCATTGCTGCTGTCATTTGCCTTGCTCTGGTGCTTCCTATAAATTATCATGGTATGGACAGAACGCATAAGCATATACCTTTTGAGTCGCTGGAAGTATTTACCATTGAGAATGTCAAAGAAGGTTCAACGTGGCTTTGGGCTCATTGTGTTGCGCTATACATCATAACATTCTCGGCTTGCACTCTTCTGTACATTGAATATAAGAGCATTACTAATTTGAGGCTACTGCATATTGTTGGATCACCTCCAAATCCAAGTCATTTCACAATTCTTGTCCGATCAGTTCCCTGCTCTTCTGAAGAATCATACTGTGAAACCGTGAAAAGGTTCTTTTCACATTACCATGCATCAGCATATTTGTCACATCAAATGATTTATAAGTCTGGTAAAGTTCAAAAACTGAAGGATGATGCTGAACATGTATGTAAGGTACTTAAAAATGCTTCACTGGACAAGACTTGTAAGCCTAGTTTTAGGCATTGTTGTTCTGCAGCATCAACACATTCTTTCAAGAAGTTTGCTATCGGAATGGATAGTGCTAATGGTGGAGCGGACAATACTGACATGAATTTAGAAACAACGAAAAAGGAATGTGCCGCTGCTTTTGTATTCTTTAAAAGTCGGTATGCTGCTCTTATGGCTGCAAAGGTACTGCAGACACCAAATCCTATGTTATGGGTGACAGACGTAGCTCCCGAACCACATGATATTTATTGGTCCAATATTTGCGTACCATATAGGCAACTTTGGATCCGTAAGATAGCTACACTTGTGGCCTCTATTGGCTTCATGCTCGTGTTCCTTATCCCTGTTACATTTGTACAAGGATTGACTCAACTAGACAAACTTCAGAAAATGTTCCCTTTTCTGAGAGGGATGCTTAAAGAGAAACTTGTGAGGCAGGTGGTGACTGGTTACCTACCAAGCGTGATATTGGTTTTATTTTTGTGCACAGTTCCACCTATGATGATGCTATTTTCTTCTGTGGAGGGGTCTATTTCTCGTAGTGAAAGGAAGAAGAGTGCATGTTGTAAAGTCTTGTACTTCACAATTTGGAACGTGTTTTTTGTTAATGTATTTACTGGTTCTGTTATCAGTCAGCTCTCGGTTTCTAGCGTAACAGATCTGCCTGCCCAACTTGCCAAGGCAGTGCCATCGCAGGCTACTTTCTTCACAACTTACGTTTTATCGTCTGGTTGGGCGAGTTTGGCATGTGAAGTTATGCAAATTTTCCCTCTTCTATGCAATATTTTCCAGAGACTCGTACTCAGACTTAAGGAAGATGCACTCGATAGCAGCCTATCTTTTCCGTACCATACAGAAGTTCCAAGAGTATTATTGTTTGGATTCCTCGGCTTCACTTGTTCTATTCTGGCACCCCTGATGTTGCCCTTCTTGTTGTTCTACTTTTTCCTTGCTTACCTTGTTTACCGAAATCAGATTATCAACGTGTACATTACAAAATATGATAGTGGGGGACAGTTCTGGCCTATTGCTCACAACACCACCGTGTTTTCGTTGATATTTTCTCAACTTATCGCGCTGGGGGTGTTTGGACTTAAACGCTCATCAGTTGCATCTGGATTCACCATTCCATTGTTGATTGGTACGCTTCTATTTCATCAGTATTGTAGGCAACGGTTTCTCCCAATATTCAAGAGCAATTCAGCACAGATTGTAACTGACATGGATCTGAGAGATGAGCACAGCGGGAGGATGGAAGAGATTTATGAGCATTTACCTGTAGCCTACAACCAGCCCAGTTTAATGGAAGATGACTCAAGCCAACCCCAATGCGTCAAACGTCACGGGGACATGGACAGAGGTCAATCTTCATCGCAAGATATGGAAAAAGGCAAGGAGCTTTCTCAAAAGGATAGACCACGCCCAGTACAACGCTCAGTGAGTTTGAACTCGGATAAATCTGTACTTGGTTTAAACCTATGA 2241 0.4172 MDINALLTSAGINIGLCVVLFSFYSVLRKQPSNVNVYFGRRLASQHSRRVDLCLERFVPSPSWILKAWETSEEEILAIGGLDGVVFVRMLVFSIRVFSIAAVICLALVLPINYHGMDRTHKHIPFESLEVFTIENVKEGSTWLWAHCVALYIITFSACTLLYIEYKSITNLRLLHIVGSPPNPSHFTILVRSVPCSSEESYCETVKRFFSHYHASAYLSHQMIYKSGKVQKLKDDAEHVCKVLKNASLDKTCKPSFRHCCSAASTHSFKKFAIGMDSANGGADNTDMNLETTKKECAAAFVFFKSRYAALMAAKVLQTPNPMLWVTDVAPEPHDIYWSNICVPYRQLWIRKIATLVASIGFMLVFLIPVTFVQGLTQLDKLQKMFPFLRGMLKEKLVRQVVTGYLPSVILVLFLCTVPPMMMLFSSVEGSISRSERKKSACCKVLYFTIWNVFFVNVFTGSVISQLSVXSSVTDLPAQLAKAVPSQATFFTTYVLSSGWASLACEVMQIFPLLCNIFQRLVLRLKEDALDSSLSFPYHTEVPRVLLFGFLGFTCSILAPLMLPFLLFYFFLAYLVYRNQIINVYITKYDSGGQFWPIAHNTTVFSLIFSQLIALGVFGLKRSSVASGFTIPLLIGTLLFHQYCRQRFLPIFKSNSAQIVTDMDLRDEHSGRMEEIYEHLPVAYNQPSLMEDDSSQPQCVKRHGDMDRGQSSSQDMEKGKELSQKDRPRPVQRSVSLNSDKSVLGLNL 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00447 747 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 4 708 IPR045122 GO:0005227
Viun8g00447 747 Pfam Calcium-dependent channel, 7TM region, putative phosphate 350 617 IPR003864 GO:0016020
Viun8g00447 747 MobiDBLite consensus disorder prediction 695 727 - -
Viun8g00447 747 MobiDBLite consensus disorder prediction 686 747 - -
Viun8g00447 747 MobiDBLite consensus disorder prediction 728 747 - -
Viun8g00447 747 Pfam Cytosolic domain of 10TM putative phosphate transporter 185 339 IPR027815 -
Viun8g00447 747 Pfam Late exocytosis, associated with Golgi transport 6 164 IPR032880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00447 Viun-Chr8 3187888 3200241 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00447 K21989 - gmx:100796574 1241.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00447 8 3187888 3200241 Viun8g00447 8 3187888 3200241 ECH
Viun8g00447 8 3187888 3200241 Viun9g03335 9 40006733 40021827 PCT