Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00445 ATGAACAAAGACGAAAGCGATCGGAACGAAAAGAAAGCGCACGATATCAAGCTTTGGGGAGTTTTCCTCTTCGGATTACTCGGCGCCGCCGTCACTGCCTTCTCCCTGTCCAGGTCGCAGTCAAGAGGAGCGAGTGGCAGTTCTTTTCGATCATCATTTCAAGAAGAAGCATGGAAGAGGTACAATAAACGACTGCAAGAGGAGTATGAGGAGGAGGTGGAGAGGGTGGAACGTATAAAGCGCATGCAAAGTGTGTTTAATCGGGAAAGGGATAAGCGTAGAAGAAGCTACGAGAGCTGGAAGGGAAATGGTAGTGGTGCACATCATCAACATTTTCAAAGAGATGATTGGTATTGGAAGGCCGAAGAATCCTTCAGAGAGCAATGGGCCAATTATCAACACACTCCAGGAGAGAGCAGAAACTATTCACTATCACATCACTACTCAGTTTTGGGTCTTGACAGGTTTAGAACAACACCCTATACAGATGCTGAGATTAAGACAGCATTTAGAACCAAGGCAATGCAGTATCATCCTGACCAGAACCAAGATAATAGAGAGGCTTCTGAGGCCAAGTTCAAAGAAGTAATTTGCTCATATGAAGCCATACAAAAGGAAAGGAAGAACCAAAATCTGTAA 639 0.4476 MNKDESDRNEKKAHDIKLWGVFLFGLLGAAVTAFSLSRSQSRGASGSSFRSSFQEEAWKRYNKRLQEEYEEEVERVERIKRMQSVFNRERDKRRRSYESWKGNGSGAHHQHFQRDDWYWKAEESFREQWANYQHTPGESRNYSLSHHYSVLGLDRFRTTPYTDAEIKTAFRTKAMQYHPDQNQDNREASEAKFKEVICSYEAIQKERKNQNL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00445 212 CDD DnaJ 147 196 IPR001623 -
Viun8g00445 212 SUPERFAMILY Chaperone J-domain 144 210 IPR036869 -
Viun8g00445 212 Gene3D DnaJ domain 133 212 IPR036869 -
Viun8g00445 212 PRINTS DnaJ domain signature 170 185 IPR001623 -
Viun8g00445 212 PRINTS DnaJ domain signature 188 208 IPR001623 -
Viun8g00445 212 SMART dnaj_3 145 208 IPR001623 -
Viun8g00445 212 ProSiteProfiles dnaJ domain profile. 146 208 IPR001623 -
Viun8g00445 212 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 6 210 - -
Viun8g00445 212 Pfam DnaJ domain 147 210 IPR001623 -
Viun8g00445 212 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00445 Viun-Chr8 3173198 3178351 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00445 139 211 Miscellaneous Gene Families AT5G49580 36.986 5.31e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00445 - - gmx:100804936 357.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00445 8 3173198 3178351 Viun8g00445 8 3173198 3178351 ECH
Viun8g00445 8 3173198 3178351 Viun9g03340 9 40046978 40052409 PCT