Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02132 ATGATGAACGGTGACTCTCGCAGTGCTCTTGAGGCACAGTACATAAGGAGGCATCACAAACATGAACCAAGGGAAAACCAGTGCACTTCTGCTCTTGTTAAACACATCAAAGCCCCTGTTCACCTTGTGTGGTCGCTGGTTAGAAGATTTGATCAACCCCAGAAGTATAAACCATTTGTTAGCAGATGCATCATGCAAGGAGACCTTGGCATTGGAAGTGTTAGAGAAGTGAATGTGAAATCTGGCCTTCCTGCCACAACAAGTACTGAGAGGTTGGAACAACTTGATGATGAGGAGCACATCCTTGGCATCAGAATTGTTGGAGGTGACCACAGGCTGAGGAACTATTCTTCCATAATAACAGTGCATCCAGAGGTGATTGAGGGAAGACCTGGAACAATGGTGATTGAATCATTTGTGGTGGATGTGCCTGATGGAAACACCAAGGATGAAACTTGCTACTTTGTGGAGGCTTTGATCAGGTGTAACCTAAGCTCTCTTGCTGATGTCTCAGAGAGAATGGCAGTTCAAGGCCGAACCGATCCCATCAACCATTAA 558 0.457 MMNGDSRSALEAQYIRRHHKHEPRENQCTSALVKHIKAPVHLVWSLVRRFDQPQKYKPFVSRCIMQGDLGIGSVREVNVKSGLPATTSTERLEQLDDEEHILGIRIVGGDHRLRNYSSIITVHPEVIEGRPGTMVIESFVVDVPDGNTKDETCYFVEALIRCNLSSLADVSERMAVQGRTDPINH 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02132 185 FunFam Abscisic acid receptor PYL9 2 181 - -
Viun10g02132 185 SUPERFAMILY Bet v1-like 28 169 - -
Viun10g02132 185 Gene3D - 2 181 IPR023393 -
Viun10g02132 185 Pfam Polyketide cyclase / dehydrase and lipid transport 33 172 IPR019587 -
Viun10g02132 185 CDD PYR_PYL_RCAR_like 28 172 - -
Viun10g02132 185 PANTHER - 25 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02132 Viun-Chr10 36187293 36191119 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02132 K14496 - gmx:100500065 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02132 10 36187293 36191119 Viun8g00489 8 3538746 3539927 ECH
Viun10g02132 10 36187293 36191119 Viun10g02132 10 36187293 36191119 ECH