Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00245 ATGTATTCTTCGCTCCACTCTTTCCTCTTCTTGGTCTTCTTCTTCACCATTCTCACCCTTACACATTCGTCAACCGAGTACCTCAAGCTACCGTTAGTCCCTCGAACAACACTCTTCAACGTCTCCAACATCCTCGCCACCGACCTCCACCGCATCTCCGGCCTCCGTACTTCGCCTCAATCCCCGCTCACCTCCGGCGCCGCCATGGGCTCCGGGCAGTACTTTGCGGACCTCCGCATCGGATCCCCGCCGCAGCGCCTCCTCCTGGTAGTCGACACCGGCAGCGACCTTGTCTGGGTGAAATGCTCCGCCTGCCGTAACTGCTCCACCAAGCGACCCGGATCCGCATTCCTGCCCCGACATTCCAGAAGCTTCTCCTCCTACCACTGCTACGACTCGCCGTGTCGATTCGTCCCTCACCCCACACCCACACACTGTAACAACCGCACCAAACTCCACACACCCTGCCGCTACGAATATTCCTATGCGGATGGGTCCACAACAACGGGCTTCTTCTCCAAGGAAACGACGACGTTCAACACCAGCTCCAACAAACATGGTAAAATTAAAAACCTGGAATTCGGGTGTGGGTTTAAAACCTCTGGCCCCAGTGTAACAGGCTCCAGCTTCAACGGCGCGCAGGGCGTAATGGGACTGGGCCGCGGGCCCATTTCGTTTACTTCCCAACTTGGACGCAAATTTGGTAACACCTTCTCTTACTGTCTTCTCGACTACACCCTATCCCCGGCCCCAAAAAGCTACCTTACAATCGGCGCCTCCTCAAACGACGTCATTTCGCGGAAGCTGTTCAGTTACACGCCTTTTGTCACTAACCCTCTGTCTCCCTCGTTTTATTACATCATCATCCAGAGTGTCTCCGTCGACGGCATTAGGTTGCCGATAAAACCTTCCGTTTGGGGGATCGATGATAACGGAAACGGAGGCACCGTCCTGGACTCCGGCACCACGCTTTCTTTTCTAGCGGAGCCAGCTTATAGGCAGGTTTTGGCCGCGTTCCGTCGGCGCGTGAAGCTTCCTGCGGCGGAGGGAACCGCCGCGCTCGGGTTCGACCTTTGTGTTAATGTCTCCGGCATCACAAGGCCGAGGCTGCCGAAGCTGAGATTCTTCCTCGCCGGAAAATCGGTGCTGTCGCCGCCGGCGGGGAATTATTTTATTGAGCCGGTGGATGGAGTAAAGTGTCTCGCGGTTCAGGCAGTTCGACCGGGTTCTGGATTTTCTGTGATTGGGAATTTGATGCAGCAAGGGTACTTGTTTGAGTTCGATTTGCACCGGTCGCGGATCGGGTTCTCGCGTCATGGATGTGCGGTTCGCTAA 1335 0.5588 MYSSLHSFLFLVFFFTILTLTHSSTEYLKLPLVPRTTLFNVSNILATDLHRISGLRTSPQSPLTSGAAMGSGQYFADLRIGSPPQRLLLVVDTGSDLVWVKCSACRNCSTKRPGSAFLPRHSRSFSSYHCYDSPCRFVPHPTPTHCNNRTKLHTPCRYEYSYADGSTTTGFFSKETTTFNTSSNKHGKIKNLEFGCGFKTSGPSVTGSSFNGAQGVMGLGRGPISFTSQLGRKFGNTFSYCLLDYTLSPAPKSYLTIGASSNDVISRKLFSYTPFVTNPLSPSFYYIIIQSVSVDGIRLPIKPSVWGIDDNGNGGTVLDSGTTLSFLAEPAYRQVLAAFRRRVKLPAAEGTAALGFDLCVNVSGITRPRLPKLRFFLAGKSVLSPPAGNYFIEPVDGVKCLAVQAVRPGSGFSVIGNLMQQGYLFEFDLHRSRIGFSRHGCAVR 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00245 444 ProSiteProfiles Peptidase family A1 domain profile. 74 437 IPR033121 -
Vimu7g00245 444 PANTHER OS07G0603500 PROTEIN-RELATED 52 441 - -
Vimu7g00245 444 Gene3D Acid Proteases 54 258 IPR021109 -
Vimu7g00245 444 FunFam Aspartyl protease family protein 266 443 - -
Vimu7g00245 444 FunFam Aspartyl protease family protein 2 55 258 - -
Vimu7g00245 444 PRINTS Pepsin (A1) aspartic protease family signature 316 327 IPR001461 GO:0004190|GO:0006508
Vimu7g00245 444 PRINTS Pepsin (A1) aspartic protease family signature 413 428 IPR001461 GO:0004190|GO:0006508
Vimu7g00245 444 PRINTS Pepsin (A1) aspartic protease family signature 80 100 IPR001461 GO:0004190|GO:0006508
Vimu7g00245 444 Pfam Xylanase inhibitor C-terminal 285 437 IPR032799 -
Vimu7g00245 444 Pfam Xylanase inhibitor N-terminal 74 258 IPR032861 -
Vimu7g00245 444 SUPERFAMILY Acid proteases 68 441 IPR021109 -
Vimu7g00245 444 CDD pepsin_A_like_plant 73 441 IPR034161 -
Vimu7g00245 444 Gene3D Acid Proteases 259 443 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00245 Vimu-Chr7 3019222 3020556 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00245 64 441 Miscellaneous Gene Families AT1G77480 24.495 4.34e-23 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00245 K22683 - gmx:100812865 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00245 7 3019222 3020556 Vimu7g00245 7 3019222 3020556 ECH