Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01024 ATGGACATCGAGCAGAGGCAATCAGAGCTCATCGACCACTTCGTCAAGCGTGCTTCCGCGGTCTCCGACGCCGCTGCACTCGCCTCCGTCCTCGTCGAAGCCACTTCTCACCCTTCGCTATTTGCTTTCTCCGAGATTCTTGCTCTTCCCAATGTTCTTCAGCTTGAAGCAACCGAGAATTCTGCTTTCCTTGATATGCTTCGGTTGTTTGCTCACGGAACGTGGGGTGATTACAAGAGTAATGCTGACCGTTTACCACAATTGATACCTGATCAGATCCTCAAGCTTAAGCAACTTACCGTTCTTACGCTTGCTGAAACACACAAGGAGTTAGATGTAACAAATGTTCGTGAACTTGAAGATTTTCTAATTAATGAATGCATGTATGCGGTAGGCATCATTCCCTACCAGAGAGGAATAGTCCGAGGAAAGTTGGATCAATTGCGTCGGTGCTTTGAGGTCCAATTTGCAGCAGGGAGGGACTTGAGGCCTGATCAACTTGGGAATATGATCCAGACTCTCTCTAACTGGTAA 534 0.4757 MDIEQRQSELIDHFVKRASAVSDAAALASVLVEATSHPSLFAFSEILALPNVLQLEATENSAFLDMLRLFAHGTWGDYKSNADRLPQLIPDQILKLKQLTVLTLAETHKELDVTNVRELEDFLINECMYAVGIIPYQRGIVRGKLDQLRRCFEVQFAAGRDLRPDQLGNMIQTLSNW 177
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01024 177 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 87 177 IPR000717 -
Vimu5g01024 177 PANTHER COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17 11 177 IPR045237 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu5g01024 Vimu-Chr5 16483606 16486945 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01024 K12180 - gmx:100801739 295.434