Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01577 ATGGGCAACCTCTTTGGCAAAAATAAAAAGGATAGCAGTCATAGTTCAAGCCATGATAAAGGAAGAGGTGGAAGAATCTTCACCAACATGACCACAAGAGGTTTACCACCCAATTTTCCATCGCAAATATCTTCGTCGTTGCCACCACCAATCTTATATCCATCTCTGGAACCACCTTCTTCGACGGCACCACCACCACCGGTGCGATCACGATCCATTTCCAAGAAACCAAGTTTTCTGAGAGTTGACTCCAAACAGAGCTCTTCGGTCATGGACAAAAAGCAATCTGCAGCCAAAAAGTATGCTCTTATCCGTGACAACTTCTCTACCCTTGAACAGGTGACAACAGCCTTAAGGAAAGAAGGATTAGAATCCTCAAATCTCATCCTTGGAATTGATTTTACAAAGAGTAATGAATGGACTGGCAGAATCTCATTCAATAAAAGAAGCCTGCATGCTATTGGAACTACACCTAATCCTTATGAGAAGGCCATCTCTATTATTGGCAAGACTTTGGCTCCCTTCGATGATGACAACTTGATTCCATGCTTTGGCTTTGGTGATGCTACTACCCATGATCAAGAAGTGTTTAGCTTTCACAGTCATCATTCACCTTGCCATGGCTTTGAGGAAGTCTTGGCTTGCTACCAGAAAATAGTTCCAAACTTGAAACTTTCAGCTGCCATAGACATAGTTGAGAAAAGCCGTGGCCAATTCCATGTGTTGGTTATAGTTGCTGATGGCCAGGTTACTAGAAGTGTCAACACTGGAGATGGAGAGCTAAGTCCTCAGGAGGAGAAGACAATTAAAGCAATCGTTGATGCAAGGTAG 831 0.4308 MGNLFGKNKKDSSHSSSHDKGRGGRIFTNMTTRGLPPNFPSQISSSLPPPILYPSLEPPSSTAPPPPVRSRSISKKPSFLRVDSKQSSSVMDKKQSAAKKYALIRDNFSTLEQVTTALRKEGLESSNLILGIDFTKSNEWTGRISFNKRSLHAIGTTPNPYEKAISIIGKTLAPFDDDNLIPCFGFGDATTHDQEVFSFHSHHSPCHGFEEVLACYQKIVPNLKLSAAIDIVEKSRGQFHVLVIVADGQVTRSVNTGDGELSPQEEKTIKAIVDAR 276
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01577 276 MobiDBLite consensus disorder prediction 51 66 - -
Vimu4g01577 276 MobiDBLite consensus disorder prediction 31 49 - -
Vimu4g01577 276 Pfam Copine 150 275 IPR010734 -
Vimu4g01577 276 PANTHER COPINE FAMILY PROTEIN 1 80 275 - -
Vimu4g01577 276 MobiDBLite consensus disorder prediction 1 91 - -
Vimu4g01577 276 MobiDBLite consensus disorder prediction 77 91 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu4g01577 Vimu-Chr4 16826372 16831854 Transposed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01577 4 16826372 16831854 Vimu4g01577 4 16826372 16831854 ECH
Vimu4g01577 4 16826372 16831854 Vimu5g00886 5 11818830 11831734 PCT