Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01576 ATGGGTAAGAGGGCAGTATTAATAGGATGCAACTACCCCGGAACAAAGGCTGAATTGAGAGGGTGTGTTAATGATGTGTGGAATATGAAGAAGTGCCTCATCAACATATATGGTTTCTCAGAAAGGGACATTGTTGTTCTCATTGACACTCATCATTCCTACACTCAACCCACCGGCAAGAACATCATATTGGCTCTGTCCAAGCTTGTCCGCTCCGCCAAGCCCCGCGACTCCCTCTTCGTCCACTACAGCGGCCACGGCACACGTCTTCCGGCGGAATCCGACGACGAAAACAATACTGGCTATGACGAATGCATTGTTCCCACAGATATGAATCTCATCACTGATGATGATTTCAGACTGCTTGTAGACAAGGTCCCAAGAGGTTGCAATATAACAATCGTTTCAGATTGCTGCCACAGTGGTGGCCTAATTGAAGCAGCAAAGGAACAAATAGGAGACAGCACAAACGAAGAAGAAGGCTACGTTTCAACCTCTCTATTTCACTTCAAAAACTTTCTTCATCGAAGCATGCACCAAGAAAAACAACAAGAAGAAACCACTGTGAAGAACCGATCTTTGCCTCTCTCAACTCTCTCAGACATACTCCAGAAGAAAACTGGCAACGACATACAAACTGGGAAACTAAGGCGTACACTCTTCCACATCTTTGGTGAAGATGCAAGTCCCAAAGTGAAGAAGTTTTCAAATTTAGTCATGAACAAACTCCAACATGTAAAGAGTGGTGAGAGTGGAGGGCACAGAATTGGGGGTGTGAGTGATCTTGCACAAAAGTTCTTCGAACAGAAGCTAAATTATGATGGTGATGAGGTGGGAAAACGTGGGGGAATGAGGAAAGAGGAACATGCTGCATCAATCAAGCGCAATGTTTTGGATTGTGGGATTCTGCTGAGTGGTTGCCAGAGTGAGCAAACTTCTGCAGATGCATGTCCTGCTGGGAATTCTGGGTCAGCTTACGGGGCTTTCAGCAATGTGATTAGAGCTATAATTGAAGAGAGTGAAGGAGCAGTGACAAACCGGGAACTTGTGCTGAAGGCTAGGATGATACTTAAGAAACAGGGTTTTTCTCAGAAACCTGGTCTCTATTGCAGTGACAGCAACGTTAATGCTCCCTTTGTTGAGTGCCACGGAGTTGAGCGCCCCAAAGAGGGGTTGAGCAGTGACATTGTTGATAAGTCAAAATGGGAAGCTCTCCCACTCCTCCTTGGGTCTTTAAGCTTCATCAATGGTGATTTTGCCCCTTTTGGGTTGAGGAAGAAGATGAGTTACAAATTGGAGATGAAAATCATGGAGCAGCTGCAAAGAACCTTGGGAAATGTTGTGCACCTTTTTATGTTACAAAATGAGAAATATGATAATAGGTACAAGATCGAGTTCCTGTCTCCAAAGAAATGGGCAAGTCATCAAGGTCAGGAATTTTCCAAAGGTTCAAAGTTGTTAGAAGAAGGAGCACTTACTATCAGGTTAGATGGTTGGTGCTTTCTTGAATCAGTTGATGTTGAGGGTCCTGTTGTTGGTGGTTATCCTAATACTCTAATACTTACCCAGTCTCAAATAGAGAAGGATATGTTATGTGGTGAGAGTGAATTTGGCCGAAGTTATATTGTGAAAGGAGTAGAGGTCACCACAAGTGCATGA 1659 0.4412 MGKRAVLIGCNYPGTKAELRGCVNDVWNMKKCLINIYGFSERDIVVLIDTHHSYTQPTGKNIILALSKLVRSAKPRDSLFVHYSGHGTRLPAESDDENNTGYDECIVPTDMNLITDDDFRLLVDKVPRGCNITIVSDCCHSGGLIEAAKEQIGDSTNEEEGYVSTSLFHFKNFLHRSMHQEKQQEETTVKNRSLPLSTLSDILQKKTGNDIQTGKLRRTLFHIFGEDASPKVKKFSNLVMNKLQHVKSGESGGHRIGGVSDLAQKFFEQKLNYDGDEVGKRGGMRKEEHAASIKRNVLDCGILLSGCQSEQTSADACPAGNSGSAYGAFSNVIRAIIEESEGAVTNRELVLKARMILKKQGFSQKPGLYCSDSNVNAPFVECHGVERPKEGLSSDIVDKSKWEALPLLLGSLSFINGDFAPFGLRKKMSYKLEMKIMEQLQRTLGNVVHLFMLQNEKYDNRYKIEFLSPKKWASHQGQEFSKGSKLLEEGALTIRLDGWCFLESVDVEGPVVGGYPNTLILTQSQIEKDMLCGESEFGRSYIVKGVEVTTSA 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01576 552 Gene3D - 256 385 - -
Vimu4g01576 552 Gene3D - 1 220 - -
Vimu4g01576 552 Pfam Caspase domain 3 374 IPR011600 GO:0004197|GO:0006508
Vimu4g01576 552 SUPERFAMILY Caspase-like 5 117 IPR029030 -
Vimu4g01576 552 PANTHER METACASPASE-4 3 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01576 Vimu-Chr4 16810794 16817960 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01576 4 16810794 16817960 Vimu4g01576 4 16810794 16817960 ECH
Vimu4g01576 4 16810794 16817960 Vimu5g00856 5 11234685 11239227 PCT