Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01572 ATGCCTCTCTTCCTCTCCGACGAGGAGTTCTCGCGGTGCTCCGATGACGGCGCCGCCGTGGCCGCGAAGGCTGACGCGTTCATCCGCGGCCTCCTACACGAGCTCGACACCGTCCGCGCCAAGGCTGACGCCGCTGACATAAACGCCGAGCAGAACTGTTCCCTCATCGAGCAGAAATACCTCTCCCTCGCCGCCGAGTTTTCCAAGTTGGAGGCCCACGTCGCCGACCTCCAATCTTCCCTCACTCAGCGCCTCCGCGAACTCACCGAGGCGCAATCGCAGAACCACCAAATTCAGTTGCAATTGGTTGAGAAAGATAGGGAGATAGAGCGGTTGAGGATGGAGGTGGGGGAATTACACAAGTCAAAGAGGCAGTTGATTGAGTTGAACGAGCAGAAGGATTTGGAGCTTAGTGAGAAGAATGCAACTATGAAGAGCTATCTTGATAAGATTGTGAGTTTCTCTGCCTTTTGGTTTCTGGTGCTCGTCCATTTAAGTGAAAATGCTGCTCATAAGGAGGCTCGATTGAGTGAAGTTGAGGCAGAATTAGCGCGGTGCCGGGCTGCTTGCAGTCGCCTTGAACAGGAGAAGGAGATCATTGAGAAGCAGAATTCTTGGCTTAATGAGGAGTTGAATGGTAAAGTTAATAGTGTTTTTGAGCTACGCAGAAAGAACGCAGATTTGGAAGCTGATACATCTTCCAAGCTTACAGATATGGAGAGACAATTGAACGAATGCTCTCAATCTCTACAATGGAATAAGGATAGAATAAGGGAGCTTGAAATGAAGCTTAAATCTGTGCAGGAGGAATTAATTTCAGCTAAAGATGCTGCAGCAACCAATGAAGAACAATTATCTGCTGAACTCTCTACTGTTAATAAGCTTAATGAGCTGTATAAAGAGAGTTCCAAGGAATTGTCAAAAAAAGCAACTGACCTAGAGGGTGTGATAAAAGCGTTGGAGTCCGACTTAAAGCAAGTTGAGGATCATTATAAAGGGGAACTTGAGAAGGAATTATCTGCCAGAAAACAGGTTGAAAAGGTAATGCCTGAAGTTGATAACCACTTGGGTGACACTGGGTTGCCAGTGGAGGTCACTGATTTAAAAGAGAAGCTTGAGAAATTTGAAGCTGAAAGTGAGGCAAGGAAGAAGACCAATGAACTGAATAATCTTCCTCTTAGCAGTTTCACTACTGAATCGTGGATGGAATCAGTTGAAGCTGATAGCATGGTGGAGGAAAATAGCTTGCTAGTCCCAAAACTTCCTCTTGGAGTTTCTGGAACTGCATTGGCGGCTTCACTTCTTCGAGATGGGTGGAGTTTGGCCAAAATGTATTCAAAATACCAAGAGGCTGTTGATGCATTGAGGCATGAACAATTGGGAAGGAAGGAGTCAGAGGCAGTACTGCAACGGGTTCTATTTGAGTTAGAGGAGAAAGCAGAAGCAATTATAGATGAAAGAGAGGAGCATGAAAAGATGGCCGATGCATACTCTTTGATGAGCCAAAAGTTGCAAAACTCCCTGAACGAAAATTCCAACTATGAGAAAACCATCCAGGAACTGAAGGCTGATCTGAAAAGGCGTGAACGTGATTATAATCTTGTCCTGAAGGAAACTGACGACCTTCGAAAGCAGGTGACAGTACTTTTAAAGGAATGTCGAGACATTCAACTTCGTTGTGGTTCAATGGGGTATGATAATGTTGATTATTCTTCAAATACTGCTTCAAGGACAATTACAGAGACTGATGCTGAGCATGTCATATCAGAGCACCTTTTGACCTTTAAGGACATTAATGGACTGGTTGAGCAGAATGTTCAACTTAGAAGCCTTGTTCGTAGTCTTTCTGGCCAGATTGAAAATCAGGAGGTGGAGTTCAAGGAGAAGCTTGAAATGGAGCTCAAAAAGCATACTGAAGTAGCTGCTTCTAAAGTTGCAGCTGTTCTGCAGAGAGCAGAAGAGCAAGGGCAAATGATTGAGGCACTTCATGCATCTGTTGCCATGTACAAAAGGTTGTATGAGGAGGAGCATAATCTTCATTTATCTCATAACCATTCTTCAGAAGCACGTGCAGTGTTGGCATCTTATCTTCTATTGATTGCTGGTTTTTCAGCTTTTGCCGAAGTTGGAAGAAACAACCTTAAGACTTCAATTGAAAGTTCACAGGAGGCTTCTAAGAAGTCCCTGGAAAAAGCTGCTGAGCGTATTAGAGGCCTTGAGGATGATTTAGCAAAGTCTAGGAGTGAGATTATTTTATTACGATCTGAACGTGACAAGATGGCACTTGAAGCAGATTTTTCTAGAGAAAGACTTGATAGCTTTATGAAAGAATTTGAGCATCAGGCATCTGAAGCAAAAGCCATTTTAGAAAGAAATGTAGAGTTTTCTCAGCTGGTTGTTGACTACCAACGAAAACTGCGTGAAAGCTCCGAGTCATTGATTGCTGCTGAGGAGCTTTCTCGGAAACTTATTATGGAGATTTCAGTTTTAAAACAAGAAAAAGAAATCATATCAAATGCTGAGAAAAGAGCGTCTGATGAGGTTCGCAGTTTGTCTGAAAGAGTGCAGCGTTTGCAGGCTAGTTTGGGCACCATACAAAGTACTGAGGAAGTTCGAGAGGAAGCAAGAGCTGCAGAGAGGGTTAAGCAAGAAGAATATATAAGGAAATTGGAGAAGGAATGGGCTGAAGCCAAGCAAGAGCTAAATGAAGAGCGGGAAAATGTGCGGAGATTCACACTAGATAGGGACCAGACCATAAAAAGTTCTCTGAGACAGGTTGAGGATATGAACAAAGAGTTAGCTAATGCTTTACGTGCAGTTGCATCTACTGAATCAAGGGCTGCTGTTGCTGAGGCAAAACTCTCTAGTCTACAAAGAAAGTTGGGTTCCTCTAATGACAAGCTTGTCGAAATGGGCGGAGAGAGTGGACCTTCCACTTTGTCAAGTGATGAGGTTGTTACTGAATTGCAAAAGGCAAAGGAGGAGATAGAAAAGTTTAAAGAGGAAGCACATGCCAACAAAGTTCACATGCTTCAGTATAAGAGCATTGCTGAGGTCAATGAAGATGCACTCAAACAGATAGAAATGGCACATGAGAAGTTTAAAACAGAGGCTGAAGATGCCAAGAAAGTTCTTGAATCTGAACTTAATTCACTTAGAGAGAAGATGTTAGAGATTGAAAATGAATCTAGTTTGAAATATGAAGAAGTTGCTTCTGAAACTGTGGGAAAGGAAGAGGCTCTTACATCTGCTATGGCTGAAATCACAAATCTTAAAGAAGAAATTTTAACAAAATCTTCTCAAATTTCAGCATTGGAAATTCAGCTATCAGGTTTAAAGGAAAACCTGGACAGGGAGCATCAGAAATGGCGGGCAGCTCAAACTAATTATGAAAGACAGGTTGTTCTCCAGTCTGAAACGATTCAGGAGTTAACAAAAACATCTGAAGCCCTATCCTTGCTGCAGGAGGAGGCATCTGAATTACGGAAACTAAACAATACTCAGAAAGTTGAAAATCGAAAATCCAAAGATCTATGCGATGCAGTGGATGTTGTAGAGTGGAACAAGGATGGAATTGCTGGAGGAGACAACAAAGCGTCTGAATTTGGGGTTTCAGCACAGATCTGGATGGGCATGTTCAGCAGAAATGAACTGAAGGCTAGGTGGGAAGAGGAGAAGGCACAATTAGAGAAGTCTAGGAATGATGCTGAAAGGAAATACAATGAAATCAATGAACAGAATAAAATATTACACAGCCAACTTGAGGCTTTTCATATTCGATGGGCTGAGAAGGAGCGTAATGCTGCTGGTATTTCATCCGGAAGTAGTAGTGCAGATGCCTTTGGTGATGCTGGACTTCAAAATGTGATTAATTATCTCAGACGATCAAAAGAAATAGTAAATATCTCTGCCTTGGCAGAAACAGAAGTTTCTTTGTTAAAACAAGAGAAGCTGCGGTTACAGTCACAGCTTGAGAGTGCTTTGAAGGCAGCAGAATCTGCACACGCATCACTAGAATCTGAGCATGCAAAATCAAAATCATTTTTGTTTACTGAAGAAGAGTTCAAATCGCTGCAACTCCAGGTCAGAGAAATGAACTTACTTCGTGAGAGTAACATGCAGCTTAGGGAAGAAAATAAACACAATTTCGAGGAGTGCCAGAAATTGCGTGAACTAGCACAAAAGGCTAGAGCTGAGACAGATAACCTCGAGAATGCCCTGAGGGAAAGAGAAATTGAGCTTGAAGGCTGTAAGAAGGAAATTGAAACACTAAAATTGGAAAAAGATAATCTCAATAACAAGGTTTTGGAGTTGCTTGAAAAGAGTAAAAACGTTGATGTTGAGGATTATGATCGAGTGAAGAAACTTGCTAGAGAAATTCAGAATGAAACAAATTCAACTTTGGATGCTTCAAATGTAGATTTCCTAGTTGAAGTTAGAAGAGATGAAGATGCTAGTGGTGGTGTTGCTCAAGCTATGGATGATTTGGAGGATAAACTAAGAGATAGGGATGCTCAGATTGAGGAAATGAGTAGAAGTCTATCAGAGAAGCAGGATTCTGTTTCACGTCTAGAAAAAGATCTTGCAAGCTGCCGATTGCAGCTTGTGGAGAGAGAGAAGAGAATTCATGACATTCTGCATAATGAGGCTAACCTAAAACTTGATTTGGAGAAGCATAGGAAACTGCTGGCTCAGTATAAGAAGAGGATTGATGTTTTGTTAAGGGAAAAGGAAGATGCAGGTAAAGAGAACCAGCAACTATCTAGGCAATTAGATGAGATTAAACAAGGGAAAAGGTCAACACCTGATACAACTGGTGAACAAGCGATGAAGGAAGAAAAGGACACAAGAATACAGATTCTGGAGAAACATCTAGAGAGACTTAGAGATGAATTAAAGAAGGAGAAGGAAGAAAGTCGCCTAGAGAGAGGGAGGCGACTGAAGAGTGAAAAGGCCATAAAGGACTCTTACAACAATGTTGAGCAGGAGAAAACAAAATTTGTTAATGAAATTGAGAAGCACAAGGAGTCTCTGAAAAAGTTATCTGACGAGGTCGAAAAGCTTAAGGTTGTTATTGGCAATCTTCCCGAGGGTTCGAATGTGGTTCAACTTCTATCTGGACCCAATGTCGATGACTTGGCTGCTTCTTACATATCTGCTGTGGAAAGTTTTGAAAAGGAAGCTCATTCAATATTTCGTGAGCTTGGAGGTCGCGGTAATCTTGGGGACGCAGCTACAAATACAGATGGTTCAACAGCTGCTACAGGTTCTCTTGTCCAAGTTCAATCCCAAAGCACCGCATCTCTGGCTGCTCCTGGAGCTAGCAGTTTACCACCAAAAGCCACTGGAGAAAGTGAGAAAAGACTTGCATTACCATTACCCAAAGCTAGTGTTGAAACTCGTCGAACAGGTAGAAAATTGGTCAGGCCTAGACTCGTAAGACCGGATGAGCCACAAGGTGACACTGAAATGTCAGATGCCGAAGGACCACTGGGCAAGACTGGGCCGTCTAGTGACACAGAGACAAGTAATGTTGCTCAATCATCTCAACCATTGGCTCGTAAACGTCTTGCTCCGACATCCAGTTCTGAGTTACGTGAAGAATCGGTTGCATCTGGAGAGAAGAACTCTGATGTAGTAGCACCTGTGTTGAAGAAGTCAAAAGGGTCAGAGTCACCAGAAGAGAGTACAGAAGAACAACCTGCTGCAGCTCTGGAATTTACTGGCAGTCAACAAGCAACTGAAGAATTATTTGATAGCAGTGAGTTGCCACAAGGCCAAAATGAAGAAGGTGAAGTCCAAAATGAAGATGGTGAAATTGCTGTTGGCAATGACGAGGACTCCAAAGATCCACAACACTTGGATGGTACAAGTCACGAGGAATTACCAGGAGACAGAACTGGAATTTTAGATGAGAATCCGGATCAACCTGATGATATGCAGAGGGATCACACTGACGCAGACAACCAGCAGTCAACATTGGCATCCAGTGGTGAGAGAGAAGAGGGAGAATTGTTGCCAGATGCTGGAGATCTTGAGGGTGGTAGTGATTTGTCTAACATTGTGGAGAACCAAGAATCTCGGGAAGGTCAATCTGAGTCTGCTGCAACCCCTGAACGTTCCCCGGCACGAGGGGATGATGATGCCCTAGAGGCTGGTGAGATTAACTCTCCTGAGCTATCAAGCGATGACAAGAATGATGAGCCTGACTTGGTTGAGGAGGCTGCCGATGGTTCTGACAAGTTAATTGATGTTAATGAGCCAATATCAGTTGAGAGTGATCAGGTAGCTGACCCGACACCTGTTGTGAGTGATGTTTCTACTTTGACTAGTAGTGTTATAGAAAGCAGTTCGTCAAAGGTGAACATACCTGTTGCAAGGCAAGGAACCCCCAATGCTCCCTCTGAAACAGATGAGACAACAAAGCAGGCATCACCTATTGGTAGTACTTCAACTACCATAAATTTGTCAGAGCGAGCACGGGAAAGGGCACAAATGAGACAGGCTGGTTTGGTTTCTACCCCTAATGTTACTAGAGGTCGCGGAAGAGCTGCTCCCCGTGGACGCGGTCGTGGTCGGACAGTAGTACGCCGGCCTCCTCCATCATCTGGTGGTGAACCATGA 6624 0.4334 MPLFLSDEEFSRCSDDGAAVAAKADAFIRGLLHELDTVRAKADAADINAEQNCSLIEQKYLSLAAEFSKLEAHVADLQSSLTQRLRELTEAQSQNHQIQLQLVEKDREIERLRMEVGELHKSKRQLIELNEQKDLELSEKNATMKSYLDKIVSFSAFWFLVLVHLSENAAHKEARLSEVEAELARCRAACSRLEQEKEIIEKQNSWLNEELNGKVNSVFELRRKNADLEADTSSKLTDMERQLNECSQSLQWNKDRIRELEMKLKSVQEELISAKDAAATNEEQLSAELSTVNKLNELYKESSKELSKKATDLEGVIKALESDLKQVEDHYKGELEKELSARKQVEKVMPEVDNHLGDTGLPVEVTDLKEKLEKFEAESEARKKTNELNNLPLSSFTTESWMESVEADSMVEENSLLVPKLPLGVSGTALAASLLRDGWSLAKMYSKYQEAVDALRHEQLGRKESEAVLQRVLFELEEKAEAIIDEREEHEKMADAYSLMSQKLQNSLNENSNYEKTIQELKADLKRRERDYNLVLKETDDLRKQVTVLLKECRDIQLRCGSMGYDNVDYSSNTASRTITETDAEHVISEHLLTFKDINGLVEQNVQLRSLVRSLSGQIENQEVEFKEKLEMELKKHTEVAASKVAAVLQRAEEQGQMIEALHASVAMYKRLYEEEHNLHLSHNHSSEARAVLASYLLLIAGFSAFAEVGRNNLKTSIESSQEASKKSLEKAAERIRGLEDDLAKSRSEIILLRSERDKMALEADFSRERLDSFMKEFEHQASEAKAILERNVEFSQLVVDYQRKLRESSESLIAAEELSRKLIMEISVLKQEKEIISNAEKRASDEVRSLSERVQRLQASLGTIQSTEEVREEARAAERVKQEEYIRKLEKEWAEAKQELNEERENVRRFTLDRDQTIKSSLRQVEDMNKELANALRAVASTESRAAVAEAKLSSLQRKLGSSNDKLVEMGGESGPSTLSSDEVVTELQKAKEEIEKFKEEAHANKVHMLQYKSIAEVNEDALKQIEMAHEKFKTEAEDAKKVLESELNSLREKMLEIENESSLKYEEVASETVGKEEALTSAMAEITNLKEEILTKSSQISALEIQLSGLKENLDREHQKWRAAQTNYERQVVLQSETIQELTKTSEALSLLQEEASELRKLNNTQKVENRKSKDLCDAVDVVEWNKDGIAGGDNKASEFGVSAQIWMGMFSRNELKARWEEEKAQLEKSRNDAERKYNEINEQNKILHSQLEAFHIRWAEKERNAAGISSGSSSADAFGDAGLQNVINYLRRSKEIVNISALAETEVSLLKQEKLRLQSQLESALKAAESAHASLESEHAKSKSFLFTEEEFKSLQLQVREMNLLRESNMQLREENKHNFEECQKLRELAQKARAETDNLENALREREIELEGCKKEIETLKLEKDNLNNKVLELLEKSKNVDVEDYDRVKKLAREIQNETNSTLDASNVDFLVEVRRDEDASGGVAQAMDDLEDKLRDRDAQIEEMSRSLSEKQDSVSRLEKDLASCRLQLVEREKRIHDILHNEANLKLDLEKHRKLLAQYKKRIDVLLREKEDAGKENQQLSRQLDEIKQGKRSTPDTTGEQAMKEEKDTRIQILEKHLERLRDELKKEKEESRLERGRRLKSEKAIKDSYNNVEQEKTKFVNEIEKHKESLKKLSDEVEKLKVVIGNLPEGSNVVQLLSGPNVDDLAASYISAVESFEKEAHSIFRELGGRGNLGDAATNTDGSTAATGSLVQVQSQSTASLAAPGASSLPPKATGESEKRLALPLPKASVETRRTGRKLVRPRLVRPDEPQGDTEMSDAEGPLGKTGPSSDTETSNVAQSSQPLARKRLAPTSSSELREESVASGEKNSDVVAPVLKKSKGSESPEESTEEQPAAALEFTGSQQATEELFDSSELPQGQNEEGEVQNEDGEIAVGNDEDSKDPQHLDGTSHEELPGDRTGILDENPDQPDDMQRDHTDADNQQSTLASSGEREEGELLPDAGDLEGGSDLSNIVENQESREGQSESAATPERSPARGDDDALEAGEINSPELSSDDKNDEPDLVEEAADGSDKLIDVNEPISVESDQVADPTPVVSDVSTLTSSVIESSSSKVNIPVARQGTPNAPSETDETTKQASPIGSTSTTINLSERARERAQMRQAGLVSTPNVTRGRGRAAPRGRGRGRTVVRRPPPSSGGEP 2207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01572 2207 MobiDBLite consensus disorder prediction 2018 2038 - -
Vimu4g01572 2207 Coils Coil 841 861 - -
Vimu4g01572 2207 MobiDBLite consensus disorder prediction 2115 2207 - -
Vimu4g01572 2207 Coils Coil 880 907 - -
Vimu4g01572 2207 Coils Coil 1088 1133 - -
Vimu4g01572 2207 Coils Coil 1611 1645 - -
Vimu4g01572 2207 Coils Coil 250 284 - -
Vimu4g01572 2207 Coils Coil 1215 1253 - -
Vimu4g01572 2207 Coils Coil 504 538 - -
Vimu4g01572 2207 MobiDBLite consensus disorder prediction 1942 1986 - -
Vimu4g01572 2207 MobiDBLite consensus disorder prediction 2115 2159 - -
Vimu4g01572 2207 Coils Coil 365 385 - -
Vimu4g01572 2207 MobiDBLite consensus disorder prediction 1764 2102 - -
Vimu4g01572 2207 MobiDBLite consensus disorder prediction 1799 1821 - -
Vimu4g01572 2207 Pfam TPR/MLP1/MLP2-like protein 1087 1176 IPR012929 GO:0006606
Vimu4g01572 2207 Pfam TPR/MLP1/MLP2-like protein 1216 1256 IPR012929 GO:0006606
Vimu4g01572 2207 Coils Coil 88 115 - -
Vimu4g01572 2207 Coils Coil 1657 1691 - -
Vimu4g01572 2207 Coils Coil 1310 1341 - -
Vimu4g01572 2207 Coils Coil 982 1009 - -
Vimu4g01572 2207 Coils Coil 1549 1597 - -
Vimu4g01572 2207 MobiDBLite consensus disorder prediction 1903 1931 - -
Vimu4g01572 2207 Coils Coil 1024 1062 - -
Vimu4g01572 2207 Coils Coil 1358 1378 - -
Vimu4g01572 2207 Coils Coil 303 337 - -
Vimu4g01572 2207 Coils Coil 1493 1534 - -
Vimu4g01572 2207 Coils Coil 473 493 - -
Vimu4g01572 2207 MobiDBLite consensus disorder prediction 1835 1867 - -
Vimu4g01572 2207 MobiDBLite consensus disorder prediction 1579 1615 - -
Vimu4g01572 2207 Coils Coil 722 756 - -
Vimu4g01572 2207 Coils Coil 1386 1448 - -
Vimu4g01572 2207 Coils Coil 162 210 - -
Vimu4g01572 2207 Coils Coil 1144 1174 - -
Vimu4g01572 2207 Coils Coil 919 960 - -
Vimu4g01572 2207 PANTHER NUCLEOPROTEIN TPR-RELATED 1 2193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01572 Vimu-Chr4 16696436 16724973 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01572 K09291 - gmx:100811882 3075.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01572 4 16696436 16724973 Vimu4g01572 4 16696436 16724973 ECH