Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02897 ATGGCAGCGACCAGCACCTCCTCCACGAATGGCTTCTTCACTCTCCGATCAACAAATAATAGCGAAAATGGTGGCGAAAGCAAGGTCAGAGGTTGCGGAAAACCTGATGGGGTGGCCATGTGGTTCATCAATGGCGTCACAACAGCTTTCTTTGCCTCCTTGGAACATTGCTGCATCAGAATTGCCACCCAAGAAGATGTCGATGAGGCCAACGACGACATGCCGTTGATCCTCAACGACGGAAACCTCCGCCACCGCCCCGCCGCCGCCACCACCACCGGAAAAAGGAAAGTTTCAATTCAAAACGACAACATAATTTCTGCGACTTCAGCTAGACGTATAGCTTCGGCCTCTGATTCCTGGACAATGAATCCTGTTAAGTTTCTTTGCTATCTTCTAGATATAAAAATGCCAAAAGTAAAGACAAATCGTGTTAAATACCCAGAGGGTTGGGAGTTAATTGAGCCTACACTCCGTGAACTCCAAGCAAAGATGAGGGAAGCCGAGAATGATCCACATGATGGAAAAAGAAAATGTGAGACATTGTGGCCAATATTTAAGATTGCACACCAGAAGAGCCGCTACATATTTGACCTCTACCATCGGAGAAAGGAAATTTCTAAAGAACTGTATGAATTCTGTCTAGATCAAGGATATGCTGACCGCAATCTAATTGCCAAATGGAAGAAGCCTGGTTATGAACGTTTATGCTGCCTGAGGTGCATGCAGCCACGCGACCACAATTTTGCCACCACTTGTGTTTGCAGAGTTCCCAAGCAACTTAGGGAGGAGAAGGTCATAGAGTGTGTTCATTGTGGATGCAAGGGTTGTGCAAGTGGAGACTGA 846 0.4657 MAATSTSSTNGFFTLRSTNNSENGGESKVRGCGKPDGVAMWFINGVTTAFFASLEHCCIRIATQEDVDEANDDMPLILNDGNLRHRPAAATTTGKRKVSIQNDNIISATSARRIASASDSWTMNPVKFLCYLLDIKMPKVKTNRVKYPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYIFDLYHRRKEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLRCMQPRDHNFATTCVCRVPKQLREEKVIECVHCGCKGCASGD 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02897 281 Pfam G10 protein 137 279 IPR001748 GO:0005634
Vimu1g02897 281 MobiDBLite consensus disorder prediction 1 26 - -
Vimu1g02897 281 ProSitePatterns G10 protein signature 1. 236 258 IPR018230 GO:0005634
Vimu1g02897 281 MobiDBLite consensus disorder prediction 1 30 - -
Vimu1g02897 281 ProSitePatterns G10 protein signature 2. 269 278 IPR018230 GO:0005634
Vimu1g02897 281 PANTHER PROTEIN BUD31-RELATED 137 281 IPR001748 GO:0005634
Vimu1g02897 281 PRINTS G10 protein signature 269 278 IPR001748 GO:0005634
Vimu1g02897 281 PRINTS G10 protein signature 148 168 IPR001748 GO:0005634
Vimu1g02897 281 PRINTS G10 protein signature 207 232 IPR001748 GO:0005634
Vimu1g02897 281 PRINTS G10 protein signature 183 206 IPR001748 GO:0005634
Vimu1g02897 281 PRINTS G10 protein signature 233 258 IPR001748 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02897 Vimu-Chr1 41348527 41358356 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02897 K12873 - gmx:100814888 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02897 1 41348527 41358356 Vimu10g03205 10 42518617 42518967 PCT