Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02883 ATGGGTCACTTTGCATTATGGAAGCTCTCACCAGATCACAAACCCAAGATGGTGCCAACCACATCCCCAAAACTGGAGGACTTCCTTGGTGGTGCAAGTATAGGAGCTCAAGACTATGGAAGGCATGAAAGAGAAGCAATGGCTCTGAGCCTAGACAGCGTCTACTATAGCAGCCAGAATGCGGAACCTGAAGCCAACAGAGGCCATCCTTCTTCTCTGGGCGTTCTTTCTGACCCCTTCAGGCAACAAACCCACCCATATTACTCTGGGCTTGGGATTTACCAAGTGGAGGAGGAAGCCAAGCAACCACACGTGACAGTTTGCAGCTCCCAAATGCCTCAAGTGGTGGAAGAAGGTGTTGCTTGCTTCAAAAACTGGGTGCCACCAAGGGGATATTCTTCCACTCAACAGAATCCGGAGCAGCAGCAAGTGAATAATAGCAGTGGCATGGGGGAGGGTCACGGTGCTTCTGGGAATGCTGGTGTTGGCTGTGGAGAGTTGCAGTCTTTGAGTTTGTCTATGAGTCCTGGTTCTCAATCTAGCTGTGTCACAGTTCCAACTCAGATCTCATCTTCCAGAACTGAATCAGTAGCTGGAGATGCCAAAAAGAGAGGCTCTGCTAAGCTTGGCCAGAAGCAACCCGTGCATAGGAAATCCATTGACACATTCGGCCAGAGAACTTCTCAGTATAGAGGAGTAACAAGGTTGGTTTACTTCACTTCAACTCGTCCCTTTATCTCTCTAGTAATTTCTTTTGCCATCATGGCAAAAATCTGA 777 0.4852 MGHFALWKLSPDHKPKMVPTTSPKLEDFLGGASIGAQDYGRHEREAMALSLDSVYYSSQNAEPEANRGHPSSLGVLSDPFRQQTHPYYSGLGIYQVEEEAKQPHVTVCSSQMPQVVEEGVACFKNWVPPRGYSSTQQNPEQQQVNNSSGMGEGHGASGNAGVGCGELQSLSLSMSPGSQSSCVTVPTQISSSRTESVAGDAKKRGSAKLGQKQPVHRKSIDTFGQRTSQYRGVTRLVYFTSTRPFISLVISFAIMAKI 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02883 258 MobiDBLite consensus disorder prediction 131 153 - -
Vimu1g02883 258 MobiDBLite consensus disorder prediction 131 160 - -
Vimu1g02883 258 MobiDBLite consensus disorder prediction 183 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02883 Vimu-Chr1 41190564 41194657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02883 137 235 AP2-EREBP Transcription Factor Family AT4G37750 46.875 1.01e-18 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02883 K09285 - gmx:100798179 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02883 1 41190564 41194657 Vimu1g02883 1 41190564 41194657 ECH
Vimu1g02883 1 41190564 41194657 Vimu10g03196 10 42466926 42470056 PCT