Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02877 ATGTTTGGAGATAAGGAGAAGGGAATAGATCAAAGGAAGAAGAGAAGGAGTGGAGAGGTCCAACAAGCGATTCCCATTTTACAGAAAGCATATGGAGATAGCATGCATAAAGTTTTACATGTTGGTCCTGACAGTTGCTATGTGGTCTCGAAATTGCTGAAGGAGGAGGAAACTGAAGCCTGGGGAATAGAACCATATGATATAGAGGAAGCTGATAGTAGTTGCAAAGCACTTATCCATAGAGGCAGTGTGCGCGTGTCTGATATCAAGTTTCCTCTTCCTTACAGGCCGAAATCTTTCTCTCTCGTAATTGTTTCAGATGCTCTGGATTACCTATCTCCAAGATACCTCAATAAAACTCTACCGGATTTGGTGAGGGTAGCATCTGATGGTGTTGTAATATTTACTGCTGTTATTGAGTCCAAAAGTTTGGTTGTTATTGTTGGAGTGAATCATCCAAAGTATGATTTCCTGTTACCGGTGTTAATATTGATGAGTTGTTGGGAGCTTGCGTCAAATAATCTCATGGTTCTGTCACTGACTTCTGATGAAATCTATAATGAAGGTTTTCCTACCACTCAAAAAGCGAAGGTAGCGGATGTTTCTAAATTTGGAAGAGCGGCCAAGATGAGAAGTTCATCCTGGTGGAGCAAGTTTTTCCTCCAGATTAACTTAGAGGAGAACGAAGCTGCTTCTAAGAAGTTTGAACAGGCTTCCACCCAGAGTTCGTATATTCCAAAGTGTCAAATATTCCACTTGAACTCACTTCATTGA 774 0.4096 MFGDKEKGIDQRKKRRSGEVQQAIPILQKAYGDSMHKVLHVGPDSCYVVSKLLKEEETEAWGIEPYDIEEADSSCKALIHRGSVRVSDIKFPLPYRPKSFSLVIVSDALDYLSPRYLNKTLPDLVRVASDGVVIFTAVIESKSLVVIVGVNHPKYDFLLPVLILMSCWELASNNLMVLSLTSDEIYNEGFPTTQKAKVADVSKFGRAAKMRSSSWWSKFFLQINLEENEAASKKFEQASTQSSYIPKCQIFHLNSLH 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02877 257 Gene3D Vaccinia Virus protein VP39 3 238 IPR029063 -
Vimu1g02877 257 MobiDBLite consensus disorder prediction 1 20 - -
Vimu1g02877 257 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 188 256 IPR044689 GO:0008168|GO:0045488
Vimu1g02877 257 MobiDBLite consensus disorder prediction 1 19 - -
Vimu1g02877 257 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 24 138 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02877 Vimu-Chr1 41105805 41107342 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02877 K23871 - gmx:100796049 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02877 1 41105805 41107342 Vimu1g02877 1 41105805 41107342 ECH
Vimu1g02877 1 41105805 41107342 Vimu10g03191 10 42432516 42435465 PCT