Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02876 ATGGACATCAATGCTCTTCTAACTTCTGCTGGAATTAATATTGCTCTGTGTGTGGTGCTCTTTTCATTTTATTCTGTATTAAGAAAACAACCCAGCAATGTTAACGTGTACTTTGGAAGGAGACTAGCCTCTCAGCATTCAAGACGCGTTGATGTCTGCTTGGAAAGATTTGTTCCCTCCCCTAGCTGGATACTGAAATCATGGGAAACGTCTGAGGAAGAGATACTAGCTATTGGTGGCTTGGATGCTGTGGTTTTTGTGAGGATGCTTGTGTTCAGTATTCGAGTGTTTTCCATTGCTGCTGTCATCTGCCTTGCTCTAGTGCTTCCTATAAATTACCATGGTAGGGACAGAACGCATAAGTATATACCTTTTGAGTCGCTGGAAGTATTTACCATTGAGAATGTCAAAGAAGGTTCAACGTGGCTTTGGGCTCATTGTCTTGCGCTATACGTCATAACATTCTCGGCCTGCACTCTTCTGTACATTGAATATAAGAGTATTACTAATTTGAGGCTACTGCATATTGTTGGATCACCTCCAAATCCAAGTCATTTCACAGTTCTTGTCCGATCAGTTCCCTGGTCTTCTGAAGAATCATACTGTGAAACCGTGAAAAAGTTCTTTTCACATTACCATGCATCAGCATATTTGTCACACCAAATGATTTATAAGTCCGGTAAAGTTCAAAAACTGAAGGATGATGCTGAACATGTGTGTAAAGTACTTAAAAATGCTTCACTGGAAAAGACTTGTAAGCCTAGTTTTAGGCATTGTTGTTCTGGAGCATCAACAAATTCTTTCAAGAAGATTTCTAATGAAATGGACAGTGTTAATGGTGGAACGGACAATACTGACATGAATTTAGAAACAACGAAAAAGGAATGTGCCGCTGCTTTTGTATTCTTTAAAAGTCGGTATGCTGCTCTTATGGCTGCAAAGGTACTGCAGACACCAAATCCTATGTTATGGGTGACAGATGTAGCTCCTGAACCGCATGATATTTATTGGTCCAATATTTGCGTACCATATAGGCAACTTTGGATCCGTAAGATAGCTACACTTGTGGCCTCTATTGCCTTCATGCTCGTGTTCCTTATCCCTGTTACATTTGTACAAGGATTGACTCAACTAGACAAACTTCAGAAAATGTTGCCTTTTCTGAGAGGGATATTTAAAGAGAAAATTGTGAATCAGGTGGTGACTGGTTACCTACCAAGCGTGATATTGGTTTTATTTTTCTGCGCAGTTCCACCTATGATGATGCTATTTTCTTCTGTGGAGGGTTCTATTTCTCGTAGTGAAAGGAAGAAGAGTGCATGTTGTAAAGTCTTGTACTTCACAATTTGGAACGTGTTTTTTGTTAATGTATTTACTGGTTCTGTTATCAGTCAGCTCTCAGTTTTTACTAGCGTAACAGACCTGCCTGCCCAACTTGCCAAAGCAGTGCCATCGCAGGCTACTTTCTTCACAACTTACGTTTTATCGTCTGGTTGGGCAAGTTTGGCATGTGAAGTTATGCAAATTTTCCCTCTTCTATGCAATATTTTCCAGAGATTCATACTCAGACTTAAGGAAGATGCGGATAGCAGCCTATCTTTTCCGTACCATACAGAAGTTCCAAGAGTATTATTGTTTGGATTCCTCGGCTTCACTTGTTCTATTCTGGCACCCCTGATGTTGCCCTTCTTGTTGTTCTACTTTTTTCTTGCTTACCTTGTTTACCGAAACCAGATTATCAACGTGTACATTACAAAATATGATAGTGGGGGACAGTTCTGGCCTATTGCTCACAACACCACCGTGTTTTCATTGATATTTTCTCAACTTATCGCGCTGGGGGTGTTTGGACTTAAACGCTCATCAGTTGCATCTGGATTCACCATGCCATTGTTGATTGGTACGCTTCTATTTCACCAGTATTGTAGGCAACGGTTTCTCCCAATATTCAAGAGCAATTCAGCACAGATTGTAACTGACATGGATATGAGAGATGAGCAAAGCGGGAGGATGGAAGAGATTTATGAGCATTTAACTTTAGCCTACAACCAGCCCAGTTTAATGGAAGAAGACGCCTCAAGCCAACCCCAATGCGACAAACGTCACGAGAACACGGACAGAGGTCAATCTTCATCAGAAGATATGGAAAAAGGCAAGGAACTTTTTAAAAAACATAGACCACGCCCAGTACAACGCTCAGTGAGTTTGAACTCGGATAAATCTGTACTTGATTTAAACCTATGA 2244 0.4069 MDINALLTSAGINIALCVVLFSFYSVLRKQPSNVNVYFGRRLASQHSRRVDVCLERFVPSPSWILKSWETSEEEILAIGGLDAVVFVRMLVFSIRVFSIAAVICLALVLPINYHGRDRTHKYIPFESLEVFTIENVKEGSTWLWAHCLALYVITFSACTLLYIEYKSITNLRLLHIVGSPPNPSHFTVLVRSVPWSSEESYCETVKKFFSHYHASAYLSHQMIYKSGKVQKLKDDAEHVCKVLKNASLEKTCKPSFRHCCSGASTNSFKKISNEMDSVNGGTDNTDMNLETTKKECAAAFVFFKSRYAALMAAKVLQTPNPMLWVTDVAPEPHDIYWSNICVPYRQLWIRKIATLVASIAFMLVFLIPVTFVQGLTQLDKLQKMLPFLRGIFKEKIVNQVVTGYLPSVILVLFFCAVPPMMMLFSSVEGSISRSERKKSACCKVLYFTIWNVFFVNVFTGSVISQLSVFTSVTDLPAQLAKAVPSQATFFTTYVLSSGWASLACEVMQIFPLLCNIFQRFILRLKEDADSSLSFPYHTEVPRVLLFGFLGFTCSILAPLMLPFLLFYFFLAYLVYRNQIINVYITKYDSGGQFWPIAHNTTVFSLIFSQLIALGVFGLKRSSVASGFTMPLLIGTLLFHQYCRQRFLPIFKSNSAQIVTDMDMRDEQSGRMEEIYEHLTLAYNQPSLMEEDASSQPQCDKRHENTDRGQSSSEDMEKGKELFKKHRPRPVQRSVSLNSDKSVLDLNL 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02876 747 Pfam Cytosolic domain of 10TM putative phosphate transporter 185 339 IPR027815 -
Vimu1g02876 747 Pfam Late exocytosis, associated with Golgi transport 6 164 IPR032880 -
Vimu1g02876 747 MobiDBLite consensus disorder prediction 689 747 - -
Vimu1g02876 747 MobiDBLite consensus disorder prediction 731 747 - -
Vimu1g02876 747 Pfam Calcium-dependent channel, 7TM region, putative phosphate 350 616 IPR003864 GO:0016020
Vimu1g02876 747 MobiDBLite consensus disorder prediction 694 723 - -
Vimu1g02876 747 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 4 697 IPR045122 GO:0005227
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02876 Vimu-Chr1 41091349 41098726 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02876 K21989 - gmx:100796574 1244.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02876 1 41091349 41098726 Vimu1g02876 1 41091349 41098726 ECH
Vimu1g02876 1 41091349 41098726 Vimu10g03189 10 42406315 42407067 PCT