Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02858 CGTTGCCCCATCTGGGTTCTTGCTAGATTTTGCTTTCAGATTCGATTCAGATTTTCCTTCTCTTTTTTTCTCTTTGTGGGTGCAAATTGGGATACGAAAAAGAAGAGATTTTTCGATAAGATGAAGAGAGGGAACGACGATGAGAAGGTGGCGGGGCCAATGTTTCCGAGGCTGCATGTAAATGATGCAGAGAAAGGAGGGCCAAGAGCTCCACCAAGGAACAAGATGGCCCTCTATGAACAACTCAGTGTTCCCTCTCAGAGGTTCAATCCACGCCTTCTGCCACTCAAACCAAATTCATCTTCTAACTTAGTTGCTCCACCAACTTCCTCAACCCAGGGAAGTGGGCATGAGAGAAGTTATGGCTACCCAGTTCGTTTACCTTCGCAAACACCTGCTCATCGAGCTGAAAGTTATGTTTCTCGCCAATCTGATGGATCAAGATCAAACACTTCATCGGTGCAGCTAGAAAGGAGAAAGAGAGCAGATGAAGATGATGTTCATGCATACATTTGCTCAAGGATTGGTCACTCTAATGATAAAACGATCAATAGGAAAAAATTCACTCCTTTGGGTGGTGGTAATTTTTACTCAGTTTCAGTGCAAAATGATGCTGAAAGAGATCCAGCACAATTTGGTTCCCTTCCTGTTGACATGAGAAAGCATGTGAGGAGTGGGAATGAGACACATCCACATGTAAGCTCAAGTAGACAGCAACCAAAAATGTCTGTCAAAAACAAATCCAGTGGAGAAGTTATTGACAGTCTAGTGATGCAAGCCAAGGTGATTCCAAATCAAGAGGATCAAGATTGTTCTGTCCCAAGTATAAGCAGGTTACATCAGGAAGGTGGTTGTCTACAGCAGGAGTGTGTGGCTGGGCCCCAATCCGGTGACGTTGATCTCCTTAACTCTACAAGGGATATGGATAATGGAAATGCCCTTGTACCAAAAAGCTGTTTTCATTCTGCACTAAACCAAACCTGTCCTGTTGAGGTTACCGATGGTGTTGATGTTGAATATCATGATGTTGGTACTGAAGGTCCATTACAGAAGGGAAATTTTGATGGAAGTGGTGATGTCTCGAAGATCTCCACGGTAACAAATTTATCAAGTCTGATAGTTTCTCCTGATGATGTTGTAGGGATATTAGGTCAAAAACATTTCTGGAAAGCAAGGCGAAAAATTGCCAATCAACAGAGAGTGTTTGCTGTCCAAGTGTTTGAATTGCACAGACTGATCAAGGTTCAACAGCTGATTGCTTCATCCCCAGATGTTTTGCTTGAAGATGGTGCTTTCTTGGGAAAATTTCCTCTGGAGGGGTCTACTCCTAAAACCATTTCCTTGCAAGTTGTCGTAGATCCCCAACAACAAACTCCCAAGCAGAAAAACAATTCTGAAAAGCAGAACCTTAAAACAGAATGTTCTGCTGAGAATGCAGTTGAGAAGAAAACGTCATTTTCGTCCCCAAAAAATGGTAGCCACCTTACAAATCACACCCCTTTTTCAGGAATTCCACACCAGGCAGATGTGGCTTCCGATAATAGAACAAGTCCCTGGAGTTTCAATCAGTCACCTCAACATCAGTGGTTAATTCCTATCATGTCTCCTTCCGAAGGGCTTGTCTACAAGCCATATCCCGGGCCGGCATTTACCAGAACGAATCCTGCAGGATGTGGCGGGCCATTTGGACAAGCACCTCTCGGTGCTACTTTCATGAATCCTGCCTTTCAATTTCCAGCTTCTCATCAAGTAGTCGGGGTGTCACCGTTTGTTTCTCTGCCCAACCACACCTACTTCTCCCCCTACGGCATGCCAGTAGTGAATCAAGCAGCAACAGGGTCAGCTGTGGAACATGTGAACCAGTTTACCGGACAAGGTTCTCATGGTCAAAATGGCCATTCATCAGTCGAGGGAGCCAGTTTTAACACTCAACATAACCAAAGCTCATCCAACTTGCCAATTCAGAGGAATGGAGCCGTGTCACATGTCAAGAAACTTCGCGTGTCCAAGGACAGACGATTACAAGGGAGCACAGCAAGCACTCCTAGTGAAACACCACAGGCAATCAGAGCAGGGAACATTGCTGAAGGAAGTGATGCACATTCTCTTTCTCTTCACTCTGTTGAAACCAGACAGCAAACACAAGTCATCAAAGTCGTTCCACACAACGGGAAATCCGCGACAGAATCAGCTGCTAGAATATTTCAATCCATTCAAGAAGAGAGAAAGCAGCATGATTTAGTGTAG 2247 0.445 RCPIWVLARFCFQIRFRFSFSFFLFVGANWDTKKKRFFDKMKRGNDDEKVAGPMFPRLHVNDAEKGGPRAPPRNKMALYEQLSVPSQRFNPRLLPLKPNSSSNLVAPPTSSTQGSGHERSYGYPVRLPSQTPAHRAESYVSRQSDGSRSNTSSVQLERRKRADEDDVHAYICSRIGHSNDKTINRKKFTPLGGGNFYSVSVQNDAERDPAQFGSLPVDMRKHVRSGNETHPHVSSSRQQPKMSVKNKSSGEVIDSLVMQAKVIPNQEDQDCSVPSISRLHQEGGCLQQECVAGPQSGDVDLLNSTRDMDNGNALVPKSCFHSALNQTCPVEVTDGVDVEYHDVGTEGPLQKGNFDGSGDVSKISTVTNLSSLIVSPDDVVGILGQKHFWKARRKIANQQRVFAVQVFELHRLIKVQQLIASSPDVLLEDGAFLGKFPLEGSTPKTISLQVVVDPQQQTPKQKNNSEKQNLKTECSAENAVEKKTSFSSPKNGSHLTNHTPFSGIPHQADVASDNRTSPWSFNQSPQHQWLIPIMSPSEGLVYKPYPGPAFTRTNPAGCGGPFGQAPLGATFMNPAFQFPASHQVVGVSPFVSLPNHTYFSPYGMPVVNQAATGSAVEHVNQFTGQGSHGQNGHSSVEGASFNTQHNQSSSNLPIQRNGAVSHVKKLRVSKDRRLQGSTASTPSETPQAIRAGNIAEGSDAHSLSLHSVETRQQTQVIKVVPHNGKSATESAARIFQSIQEERKQHDLV 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02858 748 MobiDBLite consensus disorder prediction 134 153 - -
Vimu1g02858 748 MobiDBLite consensus disorder prediction 454 503 - -
Vimu1g02858 748 MobiDBLite consensus disorder prediction 90 118 - -
Vimu1g02858 748 MobiDBLite consensus disorder prediction 673 688 - -
Vimu1g02858 748 MobiDBLite consensus disorder prediction 622 657 - -
Vimu1g02858 748 MobiDBLite consensus disorder prediction 622 689 - -
Vimu1g02858 748 MobiDBLite consensus disorder prediction 224 248 - -
Vimu1g02858 748 PANTHER PROTEIN EARLY FLOWERING 3 41 746 IPR039319 GO:2000028
Vimu1g02858 748 MobiDBLite consensus disorder prediction 229 248 - -
Vimu1g02858 748 MobiDBLite consensus disorder prediction 90 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02858 Vimu-Chr1 40857006 40861136 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02858 K12125 - gmx:100788038 1104.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02858 1 40857006 40861136 Vimu1g02858 1 40857006 40861136 ECH