Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02857 ATGAGATCCACAATGTTCATTCTCTTATGGCTGCTAATCACAGTCCATGGTATTTCTCCATCAAGACACAAGATTTTGGAAGTCGAGAGAAAATTAAAGTATCTTAGAAGACATTCCTTAAAAACTATCAAGATGGCTCCTACTCATAATTCAGCCAAGGAGGAGCTAACAGGAGGATCAAGAACTTCAAGAAATGGAAAGAATTCAAATGAATCTTTGAGTGTGACTTCACAAGTGTGGCAGAAAAGTGGAAAATGTGGAAAGGGAACAATACCAGTTAGAAGAATAAGAAAAAGAGAGCTATTGAAGGCTCATTCAATTGAAGAATATGGAAGGAAGAAGCCAAGCTTCTCTCACCATCAACATGGTGAAGTCAATAAGAATCTTGATTCCTTTGTTCAACTTAAAAATCACTCAGTGAATCCGAGTGTATATGGAGATAGACAAACTCGATTATTTGTATACTGGACGCTTGTTTTGCAGGCTGATGGTTCAAAGGAAAGTGGTTGCTTTGATCTAACATGTCCTGGGTTTATTCAGACAAGCAATGAGATTGCCTTGGGTGCTGCTATACATCCAATCTCAATTCCTGGTGACCTTCCATACGTAATTACAATTTACATCTTTAAGGATCCCTATACCAACAATTGGTGGGTGCAATATGGTGAGAAGACTAACATAGGTTATTGGCCACCGGAGTTGTTTGAAACAATACTTTACAATGCACAATCTGTGGAGTGGGGTGGTGAAGTTTACAGTACAAGCATTGGACAAACTCCTCACACAGCAACACAAATGGGCAACGGCCAATTTGCTTCAGTTTTGGAATTTTCATCTGCAATAACAAGAATGAGAATTCATGACAACTCTGAGGTCTTGAAAATCCCAGAATTGGTCTATGATTATTCTGATGAATATAATTGCTATGATGTTTGGTACATGTCAGATTACATTGATGATCCTCAATTCTATTATGGGGGTCCTGGTAGAAATCCAAAGTGCCCTTAA 1008 0.3839 MRSTMFILLWLLITVHGISPSRHKILEVERKLKYLRRHSLKTIKMAPTHNSAKEELTGGSRTSRNGKNSNESLSVTSQVWQKSGKCGKGTIPVRRIRKRELLKAHSIEEYGRKKPSFSHHQHGEVNKNLDSFVQLKNHSVNPSVYGDRQTRLFVYWTLVLQADGSKESGCFDLTCPGFIQTSNEIALGAAIHPISIPGDLPYVITIYIFKDPYTNNWWVQYGEKTNIGYWPPELFETILYNAQSVEWGGEVYSTSIGQTPHTATQMGNGQFASVLEFSSAITRMRIHDNSEVLKIPELVYDYSDEYNCYDVWYMSDYIDDPQFYYGGPGRNPKCP 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02857 335 MobiDBLite consensus disorder prediction 53 74 - -
Vimu1g02857 335 Gene3D - 124 224 - -
Vimu1g02857 335 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 54 331 - -
Vimu1g02857 335 MobiDBLite consensus disorder prediction 46 74 - -
Vimu1g02857 335 Pfam Neprosin activation peptide 42 123 IPR025521 -
Vimu1g02857 335 Pfam Neprosin 139 328 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02857 Vimu-Chr1 40853283 40856511 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02857 - - vvo:131598555 423.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02857 1 40853283 40856511 Vimu1g02857 1 40853283 40856511 ECH
Vimu1g02857 1 40853283 40856511 Vimu10g03176 10 42283329 42292011 PCT