Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02855 ATGCAATCTAGGGGTGTGACACTTGAAGAGGGAAAGGAAAGAAGCAGCCAATCGAAGCCTTTCAGACCACTGCGGCTACTTGTGTTGTTTTTTGCTCTCTGTGTTGTGTTTTCGGTCATTAGCATATATACGGTTAAGCATTTTGGAATTGAGAGTATGGTGACTACAATGAGTTCTAATTTTCAGCCATGTTATTATGAGGAGCCTGGTGGTTTGGATAAGTGGATTAGACCACCTTTGAGCCTGATCCACAATATGAGTGACAAAGAGCTGCTGTGGAGGGCTTCTTTTGTTCCAAGGATCAAGGATTATCCATATCCTAGAATTCCCAAGATTGCATTCATGTTCCTGACCAAGGGACCATTGCCTCTGGCACCCCTTTGGGAGAGGTTTTTCAAGGGTCACGAGAAGTTGTTTTCCATATATATTCATTCACTGCCCTCATATCAACCTCAGTTTCCTCCTTCTTCTGTCTTTTACGGCAGGCAAATCCCTAGCCAGGTTTCTGAGTGGGGAAGGATGAGCATGTGTGATGCTGAAAGAAGACTCCTTGCTAATGCATTGCTTGACATCTCCAACGAGTGGTTCATACTTCTCTCTGAGTCATGCATTCCCCTCTACAAATTCAGTTTTGTCTACCATTACATAATGAAATCCAAACACAGCTTCATGGGTGCATTTGATGATCGGGGTCCATTTGGAAGAGGGCGCTACAACGAGAACATGGCCCCTCTGGTGAACATCACCAAGTGGCGCAAGGGCTCGCAATGGTTTGAAGTAAACCGAAAGCTCGCCATCACCATAGTTGAAGACACGAAGTTCCATCCGATATTCGAGCGATATTGCCGGCCGGCTTGCTATGTCGACGAGCATTACTTCCCGACGATGCTCACCATTCAAGCAGCAAATGTTTTGGCCAACAGAAGCATAACCTGGGTGGACTGGTCTAGGGGTGGAGCTCACCCAGCTACATTTGGAAGAAATGACATCACTGAGGAGTTTTTTAACAGAGTACGAGGAGGTCATACATGTTTGTACAACAATAGAAACTCTTCTGTTTGTGTGCTTTTCGCCAGAAAATTTGCTCCTAGTTCTTTGGAACCTTTGTTACAAATGGTTGATTCAAAGGTATTGGAGTATTGA 1143 0.4479 MQSRGVTLEEGKERSSQSKPFRPLRLLVLFFALCVVFSVISIYTVKHFGIESMVTTMSSNFQPCYYEEPGGLDKWIRPPLSLIHNMSDKELLWRASFVPRIKDYPYPRIPKIAFMFLTKGPLPLAPLWERFFKGHEKLFSIYIHSLPSYQPQFPPSSVFYGRQIPSQVSEWGRMSMCDAERRLLANALLDISNEWFILLSESCIPLYKFSFVYHYIMKSKHSFMGAFDDRGPFGRGRYNENMAPLVNITKWRKGSQWFEVNRKLAITIVEDTKFHPIFERYCRPACYVDEHYFPTMLTIQAANVLANRSITWVDWSRGGAHPATFGRNDITEEFFNRVRGGHTCLYNNRNSSVCVLFARKFAPSSLEPLLQMVDSKVLEY 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02855 380 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 38 371 IPR044174 GO:0016757
Vimu1g02855 380 Pfam Core-2/I-Branching enzyme 112 338 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02855 Vimu-Chr1 40843996 40847171 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02855 - - gmx:100819890 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02855 1 40843996 40847171 Vimu1g02855 1 40843996 40847171 ECH