Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02853 ATGAAAGCTTGGAGGTGGCACAATCCCCAAACTCAAAACGTAGTGAAACTTGATGTTAATGACGAAAACGGGCTGGAAAGTATTTATATTTTCAGAAGACCAAAGCAAAACGACGCCGCTCTACCTGTGACAGACAGACACAGGGAATCCCTTGCTCTAGCCACCACTATAAGGCGACGTCGTAGCGACGCTCGACGGTCTGTGACTCAACCGCGAGCGGTTCAGAAAAAGGAACTAACCACTGTGGGGAACAGGAACAGAATGAAGATTGTTTCAGTTGCAGTTAGGTCACTAAGTGTCAATTTGTCCCATCAGTTTTATCAGACTCATATGTTCAGAAGCCTTTCCACTTGGGGATTTACAGCAGATAATCAAACCAGTGATCAACAGGCTAACAAGTCAGAACCTCCTGAGGAGTTTGGGAAGTTTGGAGAAAATCGTGGTAGATATCCCCAATTTGATTCCATTCTTGAAAAGATTAGCCAACAGGGAATGGCTCGACATAGATCTGGTTTTGGAAATGGTGCTGGTTATGATATGATGGATTATCTAGAAGAAAATGATGACTCATTATCTGATGGAATGGATGAAAACCTGAAGAATGCTGCCACATACTTTGAAGTTGATGAGGATGAAATTGAAAAAGAAGATTATGCTTTTCGATATGATACCGATTTACTACCTGGTTCAACATATGATACAAAGGACCTGGATCTTACCAAACCTGGTGTACGCAAGCCTCCTAGAAGGGTTGAATTCAGTGTAACCACCAAAGAAGTTCTTAGTCAAGCAGATTTCAGGAATGTAAGATTCCTGGCAAATTTCATAACAGAGGCAGGAATTATTATCAAGCGAAGCAAGACCGGCATTAGTGCAAAGGCTCAAAGAAAGGTTGCCAGGGAGATAAAAACTGCTCGAGCATTTGGCTTGATGCCCTTTACAACAATGGGAACGAAGACATTTATTTTTGGAAGAACTATGGAGAATCTTGATGAAGACTTTTCATACGAAATTAAGAAGCAGGACATGGATGAGGAACCTGATTCGGATGGAGATCAAGCTTAG 1065 0.4188 MKAWRWHNPQTQNVVKLDVNDENGLESIYIFRRPKQNDAALPVTDRHRESLALATTIRRRRSDARRSVTQPRAVQKKELTTVGNRNRMKIVSVAVRSLSVNLSHQFYQTHMFRSLSTWGFTADNQTSDQQANKSEPPEEFGKFGENRGRYPQFDSILEKISQQGMARHRSGFGNGAGYDMMDYLEENDDSLSDGMDENLKNAATYFEVDEDEIEKEDYAFRYDTDLLPGSTYDTKDLDLTKPGVRKPPRRVEFSVTTKEVLSQADFRNVRFLANFITEAGIIIKRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKTFIFGRTMENLDEDFSYEIKKQDMDEEPDSDGDQA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02853 354 Gene3D Ribosomal protein S18 233 316 IPR036870 -
Vimu1g02853 354 FunFam Ribosomal protein S18 253 316 - -
Vimu1g02853 354 SUPERFAMILY Ribosomal protein S18 244 314 IPR036870 -
Vimu1g02853 354 Pfam Ribosomal protein S18 264 311 IPR001648 GO:0003735|GO:0005840|GO:0006412
Vimu1g02853 354 Hamap 30S ribosomal protein S18 [rpsR]. 241 316 IPR001648 GO:0003735|GO:0005840|GO:0006412
Vimu1g02853 354 NCBIfam 30S ribosomal protein S18 253 314 IPR001648 GO:0003735|GO:0005840|GO:0006412
Vimu1g02853 354 PRINTS Ribosomal protein S18 family signature 271 281 IPR001648 GO:0003735|GO:0005840|GO:0006412
Vimu1g02853 354 PRINTS Ribosomal protein S18 family signature 303 313 IPR001648 GO:0003735|GO:0005840|GO:0006412
Vimu1g02853 354 PRINTS Ribosomal protein S18 family signature 289 303 IPR001648 GO:0003735|GO:0005840|GO:0006412
Vimu1g02853 354 MobiDBLite consensus disorder prediction 124 147 - -
Vimu1g02853 354 PANTHER 30S RIBOSOMAL PROTEIN S18 102 345 IPR001648 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02853 - - vun:114194755 445.662