Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03191 ATGTCGCGGAGACCCGTGAATCTGTCTCGGCGATTTGGAGACAGCGGAGGTGGATTGTTTTCATCGTCGAAATCAAAGACTTCGCCAGCTTTGTCGGTTGGGCTCATAATTTTGGTTGGTAACTTCTGTAGGGAGGACTGTTTCTCATTGGCTACGTTTACAAGGGCTCAGGTGGATTTGGCAGCCGTTTGGAGTCTTTCAGCAGGCTTCAAGAAGTTTTATAACTCTTTTGTTGAGGAAAAATCCATGTCTCACTACCTTGATGGAAAAATTCGACGAGGGCATTATAAAGATCTTCCAAATGCAGGTGATTCTTTGTGTACTGGAGAGGTCCCACGAGCAATTCCCATTTTGAAGAAAGCATATGGTGATAGCTTACACAAGGTTTTGCATGTTGGCCCTGATACTTGCTATGTGGTCTCTAATTTGCTAAAAGAGGAGGAAACTGAAGTCTGGGGTATAGAACCTTATGATATAGAGGATGCTGATGCTAATTGCAAAGCACTTATTCGCAAAGGCATTGTGCGTATGGCTGATATCAAGTTTCCTCTTCCATACAGGCCAAAAGCTTTCTCTCTTGTAATCATTTCCGATGCCCTTGATTTCTTATCTCCCAGATACCTTAACAAAACTCTTCCGGATTTGGCAAGGGTATCAACTGATGGAATAGTGATATTTACTGGTTTTCCAGATAATAAAAAGGCTAAGGGTGCAGACGTTTCTAAATATGGAAAAGCGGCTAAGATGAGGAGTTCATCCTGGTGGATCCGGTATTTCCTTCAGATTAACTTAGAGGAGAATGATGCTGCTTCCAAGAAGTTTGCACAGGCTTCAACTAAGAGTTCATATATTCCAAATTGCCAGATATTCCACTTGAAGTCTCTCAATTGA 891 0.422 MSRRPVNLSRRFGDSGGGLFSSSKSKTSPALSVGLIILVGNFCREDCFSLATFTRAQVDLAAVWSLSAGFKKFYNSFVEEKSMSHYLDGKIRRGHYKDLPNAGDSLCTGEVPRAIPILKKAYGDSLHKVLHVGPDTCYVVSNLLKEEETEVWGIEPYDIEDADANCKALIRKGIVRMADIKFPLPYRPKAFSLVIISDALDFLSPRYLNKTLPDLARVSTDGIVIFTGFPDNKKAKGADVSKYGKAAKMRSSSWWIRYFLQINLEENDAASKKFAQASTKSSYIPNCQIFHLKSLN 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03191 296 Gene3D Vaccinia Virus protein VP39 115 291 IPR029063 -
Vimu10g03191 296 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 295 IPR044689 GO:0008168|GO:0045488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03191 Vimu-Chr10 42432516 42435465 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03191 K23871 - gmx:100815049 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03191 10 42432516 42435465 Vimu10g03191 10 42432516 42435465 ECH
Vimu1g02877 1 41105805 41107342 Vimu10g03191 10 42432516 42435465 PCT