Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03176 ATGAGAGAGACAAAGGCTAAAATTTTGTTCCTTTGGGCATTCTTTGCATTGTACATCAGATTCAACGTTGAAGCAAAGCAATCATCAATGCTACAAACAGAAATTGAAGTCAAATTGAGACAACTCAACAAGCCTGCTGTCAAAACCATCAAGATGATGCCTTATTATATGCTAAAATCTGACGATTCAAGTAAAAAAGATGATTTAGAGACAGAGATATTTCAGATATGGCAAGAGAGTGGAAGTTGTCCAAAAGGAACCATTCCGATACGCAGAATCCTAAGGGAAGACTTACTTCGAGCTGATTCTCTTCGTAGTTTTGGCCGGAAATTTCCTCAACCTCTTCAAAATTTATCAGCAAACCAAAGAAAGGAATTTATTCCACAAAATCGCTCGTCAGCATATCTTGTGACAATGGGATACAATTATATTGGTTCACAAGCAGACATCAACGTCTGGAATCCAAAGGTTCCTGAGTCAGGCGAGTTCACCACAGCTCAAATATGGCTTAAAAACAACAACAATCCCTATTTTGAAAGTGTGGAATCAGGGTGGATGGTGAATCCCAAGTTGTATCGTGATGGGGCAACCAGGTTTTTTGCGTATTGGACGAGGGATTCATACAGGTCCACAGGGTGCTTTGATCTTACTTGTTCAGGATTTGTGCAAACAGGACAAGTGGTGCTTGGTGGTACCATAAAACCTATATCATCACGTCGGGGTCAACAATATGACTTTAATGTTGGAATGTTCCTGGATGCACACACAGGAAATTGGTATCTGAAGGTGAATAAGAACATCCCTGTAGGTTATTGGCCGGCTGAGATATTGGGTTCTTTGAGGCACAGTGCGATATTGGTTGAATGGGGAGGACAAGTGGCAAGTAGCAACATAAGACAAAAAACCCCTCACACGACAACACAGATGGGTAGTGGAGATTTTGCAGATGGTCGATTTAAGAATGCTTGTTTTATGAGAAACATAAGGATTATGGATTATTCGCTTCAACTCAAATTCAACGTTCAAGCAAAACCATTATCAGAAACACAAATTGAAGCCAAATTGAAGCAACTCAACAAGCCTGCTGTCAAAACCATCAAGATGATGCCTGATTATATGTTACAATTGGAAAATTCAAGCATAATAGAAGAAGATTCAGAGTCGCAGATATTTCAGACATGGCAGAAGAGTGGAAGTTGTCCACAAGGAACCATCCCTATTCGTAGAATTCTAAAGGAAGATTTACTCAGAGCTGCTTCTCTCGACAGCTTTGGCCAGAAATTTCCACAGCACTACGATAATTCAACAGGCCAAGAAGACGGATATGTTACCCCAACTCGATCGTCAGCATTTCTTCTGACAGTGGGATTCAACTACCTTGGAGCACAAGCAGACATCAACGTTTGGAATCCAAAGGTTGCTGAGACAAATGAGTTCACCACAGCTCAAATTTGGCTCAAGAACAGCAATGGTCCCTATTTTTCAAGCGTTGAATCAGGGTGGACGGTGAATCGCAAGCTATATGGTGACTTAGCCACCCGACTTTTCGCCTACTGGACTAGGGATTCATACATATCAACTGGATGCTTCGATCTTACATGTTCAGGATTTGTGCAAACAGGGCAAGTAGCACTTGGTGCTAGCATAGGACCTGTATCATTATTTTATAGAGAACAGTATGACATTAACGTTGGAATATTCCTGGAGCCAAACTCGGGAAATTGGTATCTGAAAGTGAAGAACAATATGGCAGTGGGTTATTGGCCAGCTGAAATAGTGGGATTATTGAGACACAGTGCGACATCGGTTGAGTGGGGGGGACAAGTATCGAGCACGAATATAAGAAAGAAAAGGCCTCACACCACAACACAAATGGGTAGTGGAGAGTTTGCAAATGGTCGATATCAGCAAGCATGCTACATGAAAAACATAAAGATTATGGATTATTCACTTCAGCTCAAGTATCCCAGAGATGTAACTCCAGTGGCTCAAGAGCCCTATTGTTACAGTGCCCTCAATGATGCCAGGCCTGGGATCGAACCTATGTTTTATTTTGGAGGCCCTGGTCGAGACCTACCCTACTGTCCGTGA 2091 0.4194 MRETKAKILFLWAFFALYIRFNVEAKQSSMLQTEIEVKLRQLNKPAVKTIKMMPYYMLKSDDSSKKDDLETEIFQIWQESGSCPKGTIPIRRILREDLLRADSLRSFGRKFPQPLQNLSANQRKEFIPQNRSSAYLVTMGYNYIGSQADINVWNPKVPESGEFTTAQIWLKNNNNPYFESVESGWMVNPKLYRDGATRFFAYWTRDSYRSTGCFDLTCSGFVQTGQVVLGGTIKPISSRRGQQYDFNVGMFLDAHTGNWYLKVNKNIPVGYWPAEILGSLRHSAILVEWGGQVASSNIRQKTPHTTTQMGSGDFADGRFKNACFMRNIRIMDYSLQLKFNVQAKPLSETQIEAKLKQLNKPAVKTIKMMPDYMLQLENSSIIEEDSESQIFQTWQKSGSCPQGTIPIRRILKEDLLRAASLDSFGQKFPQHYDNSTGQEDGYVTPTRSSAFLLTVGFNYLGAQADINVWNPKVAETNEFTTAQIWLKNSNGPYFSSVESGWTVNRKLYGDLATRLFAYWTRDSYISTGCFDLTCSGFVQTGQVALGASIGPVSLFYREQYDINVGIFLEPNSGNWYLKVKNNMAVGYWPAEIVGLLRHSATSVEWGGQVSSTNIRKKRPHTTTQMGSGEFANGRYQQACYMKNIKIMDYSLQLKYPRDVTPVAQEPYCYSALNDARPGIEPMFYFGGPGRDLPYCP 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03176 696 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 351 690 - -
Vimu10g03176 696 Pfam Neprosin activation peptide 49 118 IPR025521 -
Vimu10g03176 696 Pfam Neprosin activation peptide 364 433 IPR025521 -
Vimu10g03176 696 Pfam Neprosin 477 688 IPR004314 -
Vimu10g03176 696 Pfam Neprosin 161 344 IPR004314 -
Vimu10g03176 696 Gene3D - 149 266 - -
Vimu10g03176 696 Gene3D - 467 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03176 Vimu-Chr10 42283329 42292011 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03176 - - vun:114164721 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02857 1 40853283 40856511 Vimu10g03176 10 42283329 42292011 PCT