Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00404 ATGAAGTATGTTTTAGTGACAGGTGGAGTTGTTAGTGGACTTGGGAAAGGAGTTACTGCTAGCAGCATTGGAGTGCTCCTTCAGGCTTGTGGATTTCGAGTTACTTCTATCAAAATTGACCCCTACCTGAACACTGATGCAGGGACAATGTCTCCTTTTGAGCACGGTGAAGTTTTTGTCTTAGATGATGGTGGTGAGGTTGACCTTGATCTTGGAAACTATGAACGTTTCTTGGACACCAAATTAACCCGCGACAACAATATTACAACTGGAAAAATTTATCAGTCTGTTGTTGAGAAGGAAAGAAGAGGAGACTATCTTGGCAAAACTGTCCAGGTTGTTCCACACATTACGGATGCCATCCAAGAGTGGATAGAACGTGTATCCCAGATACCAGTTGATGGAAAAGAAGGCCCTGCTGATGTTTGTGTCATTGAATTGGGTGGAACTATAGGCGACATTGAATCTATGCCTTTTATTGAAGCACTTGGCCAATTTTCATACCGTGTAGGCCCTAGCAACTTCTGTTTGGTTCATGTGAGCCTTGTGCCTGTTCTCAGTGTTGTTGGTGAACAGAAAACCAAACCAACCCAGCACAGTGTTCGTCAACTTAGAGGGTTAGGGTTGGTCCCAAATCTTCTTGCTTGTCGCAGTTCAAAGGAACTTGATGATAATGTTAGGGGAAAACTTGCTCAATTTTGTCATGTGCCGTTATCAAACATACTCACTCTCTGTGATGTTCCAAATATTTGGCACATTCCTTTGCTGTTGCGAGACCAGAAGGCACATGAGGCAATCCTGAAAACGTTGAACCTTCAAGGTGTTGCTACGGAGCCTAATTTTACGGAATGGATCACTAGAACAAAAGTTTACGACACATTTCATGAATCTGTTAGAATTGCAATGGTGGGCAAATACACAGGACTTTCAGACGCATATCTTTCTGTACTGAAGGCACTTATGCACGCTTCTGTTGCTTTCAACCGCAAGCTCATAGTGGATTGGGTTCCTGCTGAAGATCTTGAAGATGATACATTCAAAGAGAATCCTGATGCATATAAAACTGCTTGGAGTCTTTTAGAGGGTGCTAATGGAATTTTAGTTCCAGGAGGTTTTGGTGATAGAGGAGTGAAAGGGAAAACTCTCGCTGCGAAGTATGCTCGAGAAAACAGTGTCCCGTATCTCGGCATTTGCTTGGGGATGCAAATTGCTGTCATTGAATTTGCAAGATCTGTTCTAGGTCTCCCTAATGCTAATAGCACAGAGTTTGATCCCGAAACTGGAAATCCCTGTGTCATATTCATGCCAGAGGGTTCAAAGACTCATATGGGGGGAACTATGCGTCTTGGTTCAAGGAGAACTTACTTCCAAGTTGCTGACTCCAAATCAGCCAAGTTGTATGGCGATGCAAGCTTTATTGATGAGCGACATCGTCATAGATATGAGGTTAATCCTGACATGATATCACAGCTTGAGACTGCTGGTCTATCTTTTGTTGGCAAAGACGAAACTGGGAGGCGTATGGAGATTGTTGAAATGCCTGGTCATCCTTTCTTTATCGGTGCTCAGTTTCACCCCGAGTTTAAGTCAAGACCAGGGAAACCTTCTCCACTATTCTCAGGATTAATAGAAGCAGCATGTGAGAGGAGGCTTTTGTCTAAAAGCAAAGGAAATGCAAACTCGGCCAATGGAATACATGAACCCCACTCTCCAGCGTCGAAAGCGCAGAACGGAAAAGGGTTAAAATCTTCCAATGGTTCCTTGAATGGTTCAAGTCCTAATGGCAATGGCATTTATGTTGATGGGGGAGTTTAG 1815 0.4342 MKYVLVTGGVVSGLGKGVTASSIGVLLQACGFRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDTKLTRDNNITTGKIYQSVVEKERRGDYLGKTVQVVPHITDAIQEWIERVSQIPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGPSNFCLVHVSLVPVLSVVGEQKTKPTQHSVRQLRGLGLVPNLLACRSSKELDDNVRGKLAQFCHVPLSNILTLCDVPNIWHIPLLLRDQKAHEAILKTLNLQGVATEPNFTEWITRTKVYDTFHESVRIAMVGKYTGLSDAYLSVLKALMHASVAFNRKLIVDWVPAEDLEDDTFKENPDAYKTAWSLLEGANGILVPGGFGDRGVKGKTLAAKYARENSVPYLGICLGMQIAVIEFARSVLGLPNANSTEFDPETGNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVADSKSAKLYGDASFIDERHRHRYEVNPDMISQLETAGLSFVGKDETGRRMEIVEMPGHPFFIGAQFHPEFKSRPGKPSPLFSGLIEAACERRLLSKSKGNANSANGIHEPHSPASKAQNGKGLKSSNGSLNGSSPNGNGIYVDGGV 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00404 604 Gene3D - 294 557 IPR029062 -
Vifa4g00404 604 PANTHER CTP SYNTHASE 1 549 IPR004468 GO:0003883|GO:0006221
Vifa4g00404 604 FunFam CTP synthase 1 292 - -
Vifa4g00404 604 FunFam CTP synthase 295 558 - -
Vifa4g00404 604 MobiDBLite consensus disorder prediction 557 604 - -
Vifa4g00404 604 NCBIfam CTP synthase (glutamine hydrolyzing) 1 545 IPR004468 GO:0003883|GO:0006221
Vifa4g00404 604 SUPERFAMILY Class I glutamine amidotransferase-like 297 549 IPR029062 -
Vifa4g00404 604 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 552 - -
Vifa4g00404 604 MobiDBLite consensus disorder prediction 576 596 - -
Vifa4g00404 604 CDD GATase1_CTP_Synthase 298 543 IPR033828 GO:0003883|GO:0006241
Vifa4g00404 604 Pfam Glutamine amidotransferase class-I 309 545 IPR017926 -
Vifa4g00404 604 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Vifa4g00404 604 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Vifa4g00404 604 Hamap CTP synthase [pyrG]. 1 550 IPR004468 GO:0003883|GO:0006221
Vifa4g00404 604 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Vifa4g00404 604 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Vifa4g00404 604 Gene3D - 1 292 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00404 Vifa-Chr4 108877588 108882364 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00404 4 108877588 108882364 Vifa4g00404 4 108877588 108882364 ECH