Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00397 ATGGCAAAAAAAGCTGTGTTGATTGGGATCAACTATCCTGGAACAAAAGCTGAGTTAAGAGGATGTGTCAACGATGTCTGGAGGATGCACAAATGCTTGATTGAACGATACGGATTTTCCGAAGACGACATCACCGTTTTGATCGACACCGATTCCTCGTACACCGAGCCCACGGGAAAGAACATACGTCGTGTGCTGTCGGAGTTGATCCGATCCGCGGAGGATGGAGATGTGCTGTTCGTTCATTATAGTGGACATGGCACGCGTCTTCCGGCTGAAACTGGAGAGGATGATGATACTGGTTTTGATGAATGTATCGTTCCTTCTGATATGAATCTCATCACTGATGATGATTTCAAGGAATTTGTGGATGGGATTCCTAGAGGATGTAGGCTGACGATTGTATCTGATTCTTGTCATAGTGGTGGCTTGATTGAAGAAGCTAAGGAGCAGATAGGAGAGAGCACAAAAGGAGAAGGAGAAGAGGAAAAATCTGGATCTGGCTTTGGATTCTCAAGCTTTCTGCATAGGAAAGTTGAGGATGCCATTGAGTCCAGGGGATTTCACGTCCCTTCGGGATTGCGCCATCATAAAGACAGGGGCGAAGAAGATGAAGAAGCTGAAGATGGGAACAGCGAACTCCCGCATGGGAACTATGGTTATGTAAAGAATAAGTCTCTGCCACTCTCAACCCTCATTGAGATACTCAAGCAGAAAACTGGAAAAGATGATATAGATGTTGGGAAACTGAGACCTACCCTGTTTGATGTTTTTGGGGAAGATGCTAGCCCTAAAGTGAAGAAGTTTATGAAGGTTATCCTCAACAAACTCCAACAAGGAGGTGGTGAAGGTGAACATGGTGGGATACTGGGAATGGTGGGCAGTCTTGCCCAACAGTTTCTCAAGCAAAAGCTGGATGAGAATGATGAGGGATATGCAAAACCTGCCATGGAAACAAAAGTGGGAAGTAAGCATGAAGTATATGCTGGATCATCAAAGCGCGGTATGCCAAGTGGTGGGATTCTGATGAGCGGCTGTCAGACAGACCAGACTTCAGCAGATGCTTGTCCTGCCGGAAATGCAGCTAATGCTTATGGAGCTTTCAGTAATGCAATACAAGCTATAATTGAGGAGACTGATGGTTCAGTTACATATTCAGAGCTTGTTCACAAGGCTAGACAGAAGCTACAGAAGGCCGGTTTCACTCAAAAGCCTGGACTCTACTGCAGTGATCACCATGTTAATGAACCATTCGTGTGCTGA 1263 0.4553 MAKKAVLIGINYPGTKAELRGCVNDVWRMHKCLIERYGFSEDDITVLIDTDSSYTEPTGKNIRRVLSELIRSAEDGDVLFVHYSGHGTRLPAETGEDDDTGFDECIVPSDMNLITDDDFKEFVDGIPRGCRLTIVSDSCHSGGLIEEAKEQIGESTKGEGEEEKSGSGFGFSSFLHRKVEDAIESRGFHVPSGLRHHKDRGEEDEEAEDGNSELPHGNYGYVKNKSLPLSTLIEILKQKTGKDDIDVGKLRPTLFDVFGEDASPKVKKFMKVILNKLQQGGGEGEHGGILGMVGSLAQQFLKQKLDENDEGYAKPAMETKVGSKHEVYAGSSKRGMPSGGILMSGCQTDQTSADACPAGNAANAYGAFSNAIQAIIEETDGSVTYSELVHKARQKLQKAGFTQKPGLYCSDHHVNEPFVC 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00397 420 MobiDBLite consensus disorder prediction 152 171 - -
Vifa4g00397 420 PANTHER METACASPASE-4 2 419 - -
Vifa4g00397 420 Pfam Caspase domain 3 411 IPR011600 GO:0004197|GO:0006508
Vifa4g00397 420 SUPERFAMILY Caspase-like 6 120 IPR029030 -
Vifa4g00397 420 MobiDBLite consensus disorder prediction 186 219 - -
Vifa4g00397 420 Gene3D - 308 420 - -
Vifa4g00397 420 Gene3D - 1 177 - -
Vifa4g00397 420 MobiDBLite consensus disorder prediction 186 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00397 Vifa-Chr4 105599269 105600916 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00397 4 105599269 105600916 Vifa4g00397 4 105599269 105600916 ECH