Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04819 ATGAGCAAGGGACATAGTCAGAACATGTTTATGAGAATCATGTGTTCACCAATAAGAGCACTTGGAAAAGCAAGAGATGCATACGTAAGAAGCATAACAAACTGTGGTCATAGTATGAGTTACGGTAGTTATCCAATGGATTCTGCTAGTAGATTCTCTTCTCTATCAAGAACTCAAAGTACAGCAACATCAAGAAGATCATCATCATCGTCATCATCGTTATCAAGACTTGATAGTAATGAAGATTTTGCCGAGCTTGTTAGAGCCGCTTCTGCTAGAACTTTGGGGAATAGAATTGACATGGATTTGGTTCTAAAACAACGACAGCAACAAGAACAACAAAAGATGAATAAAAAGTTACCTAAGTCTAGTAGTGTTGGGATGGCTAAGATTGATGAAGATATGCCGTTTGATTCTAGTGTTGGGAATGGTGTTGGTTTTGTTGTTGATTCTTATCCCAGATCTAAGAGTTATGCTGTTGGAAATAGAACTAGGAATGGTGTTTTTTGA 510 0.3745 MSKGHSQNMFMRIMCSPIRALGKARDAYVRSITNCGHSMSYGSYPMDSASRFSSLSRTQSTATSRRSSSSSSSLSRLDSNEDFAELVRAASARTLGNRIDMDLVLKQRQQQEQQKMNKKLPKSSSVGMAKIDEDMPFDSSVGNGVGFVVDSYPRSKSYAVGNRTRNGVF 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04819 169 PIRSF UCP031279 1 168 IPR016972 -
Vifa3g04819 169 PANTHER OS07G0123800 PROTEIN 1 163 - -
Vifa3g04819 169 MobiDBLite consensus disorder prediction 55 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04819 Vifa-Chr3 1394831820 1394832329 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04819 - - tpra:123917462 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04819 3 1394831820 1394832329 Vifa3g04819 3 1394831820 1394832329 ECH
Vifa3g04819 3 1394831820 1394832329 Vifa2g03704 2 1083377170 1083377658 PCT