Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04775 ATGGATTTCATGAAAGTCTTCGATCAAACCGTTCGAGAAATAAAAAGAGAGGTGAATCTGAAAGTGCTGAAGGTTCCTGAGATCGAACAGAAGGTGTTGGATGCAACTGATGATGAACCTTGGGGTCCTCATGGTACTGCTTTGGCAGAGATTGCAACGGCTACCAAAAAATTTACTGAATGTCAGCTGGTTATGAATGTCCTTTGGACAAGATTGACTGAAACCGGAAAGGATTGGCGATATGTATACAAGGCTTTAGCTGTTATAGAGTATTTGGTATCACATGGATCTGAACGTGCAGTTGATGACATTATAGAACATACTTTTCAGATCTCTGCACTTTCTAGTTTTGAATATGTTGAGCCCAGTGGGAAGGATGTGGGACTCAATGTAAGGAAGAAGTCAGAAAACATTGTGTCCCTTTTGAATGATAGAGAAAAGATAAGTCAAATCAGAAATAAAGCTGCTGCAAACCGTGACAAGTATGTTGGAGTTTCATCTAGTGGAATCACGTACAAATCCGGGACAACCTCGTTTAGTAGTGGGAGTTCCCAGAGCAGTAGTAAGTATGGAGGTTTTGGTTCAAGAGACAGTGATAGGTATAGTGATAGCTACGGAGACAAGGGGCGTTATGATGAAGAAAAAGTAGACAACAATTACTCAGTAAAATCACGCCATGGTGTATCAAGTAATGATCAAGAAAACTCTTTCAAGAAGGGTTCTGCACGGTCTGTCAGCAAAAGTAAGGAGAAGATATCATCAAGAGCATCAAAGTCATCTGCTAATGCAAGTTCAGTTCCTTCTCAGAGTACAAGTGTAACTGCAAACAATACTGAGGATGACTTTGATGATTTTGATCCAAGAGGAACGTCTACTAAGACTACAGTTGGGAGCTCAAACCAGGTTGATCTCTTTGGACAAGATTTGATTGGTGACCTCATGGATGCTCCAACATCTGTTTCTGTAGAAAAGCAAGCAGCTAATGATGTGCCAGAGGTTGATCTCTTTGCAGATGCGGCATTTGTATCAGCACCACTACAAATGGACAAGGGAGCTAGTTCTCAACCACAGGAAGAAGTGGATCTTTTTTCTTCTCAACCAGCCATTGCTTCAGCTACACCAACAGTTGACTTGTTTTCCATTCCTGCACCAGCTGTGCAGCCTGACAGCAAGTCGGAAAACTCTGTTCCTGTGAATGACAGCACTTTTGATCCCTTCGCTTCTGTTCCACTTAATAATTTTGATGGATCTGATTTTTTTGGCGATTTTACTTCTCAAACTGATTCTGTATCTTCACAGCCCTCAGCTAATCCTATCTCCGATGGTAGTACAAGTGCTAAATCTTTAGCGGACTCTAACGTTTCACCTAAAAAGGATGCTTTTCAGGTGAAATCTGGCATTTGGGCTGATTCACTAAGCCGTGGATTGATTGATCTCAATATATCTGCTCCCAAAAAAGTTTCCCTTGTAGATGTTGGCGTTGTGGGTGGATTGACTGATGGATCAGATGAAAGGGAGAAAGGCCCTCCAGCTACATTTTACATGGGTAGAGCCATGGGTTCGGGATCTGGCCTTGGTATGTATGGTGGCACTCCTTCACAGCCGCCAGCAACTGGAGACGACATGTTTTCAAACTTTGGCAGCCAAAACTATCAATTTGGTGGGTTCCAAAAGTAA 1677 0.4228 MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDDEPWGPHGTALAEIATATKKFTECQLVMNVLWTRLTETGKDWRYVYKALAVIEYLVSHGSERAVDDIIEHTFQISALSSFEYVEPSGKDVGLNVRKKSENIVSLLNDREKISQIRNKAAANRDKYVGVSSSGITYKSGTTSFSSGSSQSSSKYGGFGSRDSDRYSDSYGDKGRYDEEKVDNNYSVKSRHGVSSNDQENSFKKGSARSVSKSKEKISSRASKSSANASSVPSQSTSVTANNTEDDFDDFDPRGTSTKTTVGSSNQVDLFGQDLIGDLMDAPTSVSVEKQAANDVPEVDLFADAAFVSAPLQMDKGASSQPQEEVDLFSSQPAIASATPTVDLFSIPAPAVQPDSKSENSVPVNDSTFDPFASVPLNNFDGSDFFGDFTSQTDSVSSQPSANPISDGSTSAKSLADSNVSPKKDAFQVKSGIWADSLSRGLIDLNISAPKKVSLVDVGVVGGLTDGSDEREKGPPATFYMGRAMGSGSGLGMYGGTPSQPPATGDDMFSNFGSQNYQFGGFQK 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04775 558 MobiDBLite consensus disorder prediction 425 455 - -
Vifa3g04775 558 FunFam Clathrin interactor 1 18 165 - -
Vifa3g04775 558 PANTHER EPSIN/ENT-RELATED 4 538 - -
Vifa3g04775 558 Pfam ENTH domain 27 147 IPR013809 -
Vifa3g04775 558 MobiDBLite consensus disorder prediction 425 452 - -
Vifa3g04775 558 MobiDBLite consensus disorder prediction 255 278 - -
Vifa3g04775 558 SMART enth_2 26 152 IPR013809 -
Vifa3g04775 558 MobiDBLite consensus disorder prediction 525 558 - -
Vifa3g04775 558 SUPERFAMILY ENTH/VHS domain 7 150 IPR008942 -
Vifa3g04775 558 Gene3D - 19 165 IPR008942 -
Vifa3g04775 558 MobiDBLite consensus disorder prediction 200 221 - -
Vifa3g04775 558 MobiDBLite consensus disorder prediction 222 242 - -
Vifa3g04775 558 MobiDBLite consensus disorder prediction 176 193 - -
Vifa3g04775 558 MobiDBLite consensus disorder prediction 176 299 - -
Vifa3g04775 558 CDD ENTH 28 144 - -
Vifa3g04775 558 MobiDBLite consensus disorder prediction 537 558 - -
Vifa3g04775 558 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04775 Vifa-Chr3 1376798787 1376805007 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04775 K12471 - gmx:100809198 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04775 3 1376798787 1376805007 Vifa3g04775 3 1376798787 1376805007 ECH