Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04757 ATGGACTTTTCTCAACTCTCCACTCTTCTCTTTTTCACCTTCCTCGCCGTCGTCTCCGGCAGCCGTGACCTCCCCGGAGACTATCTCCGATTGCCTTCTCAAACCTCCAGATTCTTCCGTGAACCTGAAAACGATGACAACGTTCAGGGAACTAGGTGGGCGATTCTACTCGCCGGTTCTAATGGTTACTGGAATTATAGACATCAGGCTGATGTTTGTCACGCGTATCAATTATTGAGGACAGGTGGTTTGAAAGAAGAAAACATTATTGTTTTCATGTATGATGATATTGCTTCCGATGAAGAGAATCCAAGGCCTGGTGTCATAATTAACAAACCAGATGGTGATGATGTTTATGCAGGAGTTCCAAAGGATTATACTGGTGAAGAAGTACATGCGGACAATTTCTATGCTGCTTTACTTGGAAATAAATCAGCTCTTACAGGTGGGAGTGGGAAAGTTGTGGATAGTGGTCCCAATGATCATATTTTTGTATACTACACTGATCATGGTGGTCCAGGGGTTCTTGGTATGCCTGCTGGTCCTTACTTGTATGCATCTGATCTGAATGAAGTCTTGAAGAAAAAGCATGCTTCTGGAACATATAAGAGCCTAGTATTTTATCTCGAGGCATGTGAATCTGGGAGTATCTTTGAAGGTCTTCTTCCAGAAGATCTCAATATCTACGCGACAACAGCTTCAAATGCGGAAGAAAGTAGTTGGGCAACATATTGCCCCGGGGATATCCCTCCCCCACCCCCAGAGTACTCTACATGCTTGGGTGACCTATACAGTGTTGCTTGGATGGAAGACAGTGACACACACAATTTGCGAACTGAAAGTTTGCAACAGCAATATAAATTGGTTAAGGATAGGACTATTAGTGGACTATATGGATCTCATGTGATAGAATATGGTGATGTAGGTCTTAGCAACAATGATCTCTACCAATATTTGGGTACAAATCCTGCCAATGATAATAATTCCTTTGTGGATGAAACTGAAAACTCCTTGAAATTGAGAATACCTTCAGCCGCAGTCAACCAAAGGGATGCTGATCTCATCCATTTCTGGGAAAAGTTCCGCAAAGCACCCGAGGGTTCTTCGCGGAAAAACGAAGCTGAGAAACAAGTTTTGGAAGCAATGTCTCACAGGAAGCATATAGACAACAGTGTGAAACTGATTGGGAAGCTCTTATTTGGCATTGAAAAGGGTACTGAACTGTTTGACGCTGTTAGACCTGCTGGATCACCACTTGTTGATAACTGGGACTGCCTCAAAACCATGGTAAAGACTTTTGAGACACATTGTGGATCCCTATCTCAGTATGGTATGAAACATATGAGGTCTTTTGCGAACATCTGCAATGCAGGAATACCGAATGAGCAAATGGCTGAGGCCTCATTACAAGCTTGTGCCAGTATTCCTGCTAACCGCTGGAGTTCTCTGCAAGGAGGTTTCAGTGCATAG 1470 0.434 MDFSQLSTLLFFTFLAVVSGSRDLPGDYLRLPSQTSRFFREPENDDNVQGTRWAILLAGSNGYWNYRHQADVCHAYQLLRTGGLKEENIIVFMYDDIASDEENPRPGVIINKPDGDDVYAGVPKDYTGEEVHADNFYAALLGNKSALTGGSGKVVDSGPNDHIFVYYTDHGGPGVLGMPAGPYLYASDLNEVLKKKHASGTYKSLVFYLEACESGSIFEGLLPEDLNIYATTASNAEESSWATYCPGDIPPPPPEYSTCLGDLYSVAWMEDSDTHNLRTESLQQQYKLVKDRTISGLYGSHVIEYGDVGLSNNDLYQYLGTNPANDNNSFVDETENSLKLRIPSAAVNQRDADLIHFWEKFRKAPEGSSRKNEAEKQVLEAMSHRKHIDNSVKLIGKLLFGIEKGTELFDAVRPAGSPLVDNWDCLKTMVKTFETHCGSLSQYGMKHMRSFANICNAGIPNEQMAEASLQACASIPANRWSSLQGGFSA 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04757 489 Gene3D - 50 343 - -
Vifa3g04757 489 Pfam Peptidase C13 family 52 320 IPR001096 GO:0006508|GO:0008233
Vifa3g04757 489 CDD legumain_C 351 472 - -
Vifa3g04757 489 FunFam Vacuolar-processing enzyme beta-isozyme 349 477 - -
Vifa3g04757 489 PANTHER HEMOGLOBINASE FAMILY MEMBER 30 474 IPR001096 GO:0006508|GO:0008233
Vifa3g04757 489 PIRSF Legumain 1 489 IPR001096 GO:0006508|GO:0008233
Vifa3g04757 489 PIRSF AE 1 489 IPR043577 GO:0004197|GO:0051603
Vifa3g04757 489 PRINTS Hemoglobinase (C13) cysteine protease signature 153 172 IPR001096 GO:0006508|GO:0008233
Vifa3g04757 489 PRINTS Hemoglobinase (C13) cysteine protease signature 125 140 IPR001096 GO:0006508|GO:0008233
Vifa3g04757 489 PRINTS Hemoglobinase (C13) cysteine protease signature 78 107 IPR001096 GO:0006508|GO:0008233
Vifa3g04757 489 PRINTS Hemoglobinase (C13) cysteine protease signature 202 218 IPR001096 GO:0006508|GO:0008233
Vifa3g04757 489 PRINTS Hemoglobinase (C13) cysteine protease signature 53 77 IPR001096 GO:0006508|GO:0008233
Vifa3g04757 489 Gene3D - 349 479 IPR046427 -
Vifa3g04757 489 FunFam Vacuolar-processing enzyme beta-isozyme 50 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04757 Vifa-Chr3 1373294048 1373297482 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04757 K01369 - gmx:547700 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04757 3 1373294048 1373297482 Vifa3g04757 3 1373294048 1373297482 ECH