Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03737 ATGAAGAAAGACGCTAGAAACGACGAGTCAGAAGACCCGAAACTTTGGGGAGCGCTTCTGTTCGGCTTAATTGGCGCCACCGCCACTACTCTCGTCTTCGGTCAGCTACGGAAGACTGCTGAATGGCTATCTCTGCTATCTAGGTCTCAAGGGTGGAAAGGAAAAAGTGGGAGTACTTATAGGACAGCTTTTCAGGAAGAGGCATGGAGAAAACATAATAAACGAATGCAAGAGGAGTATGAAGAGGAGATGGAGAGAGTTGTGAGTTTTCTTTCTTCTTTTATTTATCTGGCTGGGTTTGTTATCGTCATTGTTGTGATAAATTTTATTGGTCTAGGCAGGGAACGAATAAGGCGTATGCAAAACGTGTTTAACAGAGAAAGAAATAAGTACAAAAGAGGCTATGAAAGCTGGAAGGAACATGGTCCTAGCCCATATCATCAACATTTCCAAAGAGAAGATTGGTATTGGAAGACTGATACTTCATACAAAAACAGGAGGACTAATTATCGAGAAACTCCAAGAGAGAGCAGAAACTATGCATTATCACATCACTATTCAGTTTTGGGTCTTGACAGGTTTAGGAAAGCACCATATTCAGACGCTGAAATTAAGTCAGCATTTAGGACAAAGGCAAAGGAGTATCATCCTGATCAGAACCAGGATAATAAAGACGTTGCTGAAGCCAAGTTCAAAGAAGTGATGACTTCATTCGAGGCCATAAAACAAGAGAGAAATAACCAAAATCTGTAA 753 0.4104 MKKDARNDESEDPKLWGALLFGLIGATATTLVFGQLRKTAEWLSLLSRSQGWKGKSGSTYRTAFQEEAWRKHNKRMQEEYEEEMERVVSFLSSFIYLAGFVIVIVVINFIGLGRERIRRMQNVFNRERNKYKRGYESWKEHGPSPYHQHFQREDWYWKTDTSYKNRRTNYRETPRESRNYALSHHYSVLGLDRFRKAPYSDAEIKSAFRTKAKEYHPDQNQDNKDVAEAKFKEVMTSFEAIKQERNNQNL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03737 250 CDD DnaJ 185 234 IPR001623 -
Vifa2g03737 250 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 248 - -
Vifa2g03737 250 Pfam DnaJ domain 185 246 IPR001623 -
Vifa2g03737 250 Gene3D DnaJ domain 165 250 IPR036869 -
Vifa2g03737 250 Coils Coil 66 86 - -
Vifa2g03737 250 PRINTS DnaJ domain signature 208 223 IPR001623 -
Vifa2g03737 250 PRINTS DnaJ domain signature 226 246 IPR001623 -
Vifa2g03737 250 SMART dnaj_3 183 246 IPR001623 -
Vifa2g03737 250 SUPERFAMILY Chaperone J-domain 183 245 IPR036869 -
Vifa2g03737 250 ProSiteProfiles dnaJ domain profile. 184 246 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03737 Vifa-Chr2 1093259595 1093263526 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03737 - - mtr:25490002 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03737 2 1093259595 1093263526 Vifa2g03737 2 1093259595 1093263526 ECH
Vifa3g04793 3 1382785584 1382788993 Vifa2g03737 2 1093259595 1093263526 PCT