Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09189 ATGAAACCCTCCATGTTTCATCTCTTTGTCTTGTTCTTCATTCTAAGCTACGTTCAAGGTCGTTTTGTGGTGGAGAAAAACAGCATAACTGTTCTGTCACCACATAAGCTAAGAGGTAAAAAAGATGGTGCCATAGGAAACTTTGGAATTCCAAATTATGGAGGCTATATTCTTGGATCACTGGTTTATCCAGACAAAGGCTCTCATGGTTGTCAAGTCTTTGAAGGTGATAAGCCTTTCAAGTTTCGGTCTAATCGTCCAATTATTGTTCTTCTTGATCGTGGAGAGTGTTACTTTGCCTTAAAGGTATGGCATGCACAGCTGGCTGGAGCTGCAGCGGTGTTAGTAACTGACAGTATTGATGAGACACTAATAACAATGGATTCACCCGAGGAGAGCACTGATGCAGACGGGTACATAGAAAAGATTGTAATACCGTCGGTTCTAATTGAAAAATCCTTTGGGGATTCGTTGAAGGATTCTCTAAGTAACCAAGACGAAGTTTTGATAAGAATAGACTGGAGGGAATCTGTACCTCACCCTGACAATCGGGTCGAGTATGAGTTCTGGACCAACAGCAACGACGAATGTGGCCCTCGTTGCGATGAACAGATGGATTTTGTGAAGAATTTTAAGGGTCATGCTCAGATTCTTGAGAGAGGTGGGTATACACTGTTTACTCCACATTATATAACATGGTTTTGTCCAAAGCCGTTTATCGAAAGCAGTCAGTGCAAGTCTCAATGTATAAACCACGGACGATATTGCGCGCCGGATCCTGAGAAGGATTTTGGTGAGGGATATGAAGGGAAGGATGTAGTGTATGAGAATTTAAGGCAGCTTTGTGTTCATAGAGTAGCGAACGAGAGTAACCGTTCGTGGGTGTGGTGGGATTATGTGACAGATTTTCATGTTAGGTGTTCTATGAAGGAGAAAAAATACAGCAAAGATTGTGCTGAACTTGTCATGAAATCCTTAGATCTTCCTATTGAGAAAATTAAGAAATGTGTTGGTGACCCTGAAGCTGATGTGGAGAATGAAGTTCTAAAGATCGAACAAACAGCACAGATTGGAGGAGGATCTCGTGGCGATGTAACCATCTTGCCAACATTGATTTTAAACAATGTCCAGTATAGAGGAAAATTGGAGAGAACATCTGTTTTGAAGGCGATATGTGCAGGATTTAAGGAAACTACTGAACCTCAAGTTTGTTTAAGTGGAGATATTGAAACTAATGAGTGTCTACAAAGAAGAAACGGAGGATGCTGGCAAGACAGAAGTGCTAATGTAACTGCTTGCAAGGATACTTTCAGGGGAAGAGTTTGTGAGTGTCCTGTTGTGGAAGGTGTTCAATATAAGGGTGATGGTTATACAACATGCGAAGCTTTTGGACCTGCAAGATGCTCTATAAACAATGGAGGTTGTTGGTCAGAAACTAGAAATAAAATTACTTTCTCCGCTTGTTCAGAATCCAAGGTAAATGGCTGTCACTGCCCAGATGGATTTGTTGGAGATGGTATTAAATGTAAAGATATTGATGAATGTAAGGAAAAAAGTGCTTGTCAATGTGATGGCTGCAGCTGCAAGGACACTTGGGGTGGTTATGATTGTAAATGCAAAGGAGATCTTCTTTACATCAAGGAACAAGATATTTGCATTGAAAGAAATGGATCAAAATTTGGAAAGATACTTGCGATTGTGGTCATAGCAGTTGTTGCGATAGCTGGTCTAGCTGGTTACATATTCTACAAATATAGACTCAGGTCTTACATGGATTCCGAGATCATGGCTATCATGCAATGTGTAAGAAATGCGAGACATAATAAGCACAAGAGAAGATTGAATGTATATTTGCTGAGAACATTTCGCGGCGGAGGAAAAAATTCGGTACTTTTACTATAG 1902 0.4054 MKPSMFHLFVLFFILSYVQGRFVVEKNSITVLSPHKLRGKKDGAIGNFGIPNYGGYILGSLVYPDKGSHGCQVFEGDKPFKFRSNRPIIVLLDRGECYFALKVWHAQLAGAAAVLVTDSIDETLITMDSPEESTDADGYIEKIVIPSVLIEKSFGDSLKDSLSNQDEVLIRIDWRESVPHPDNRVEYEFWTNSNDECGPRCDEQMDFVKNFKGHAQILERGGYTLFTPHYITWFCPKPFIESSQCKSQCINHGRYCAPDPEKDFGEGYEGKDVVYENLRQLCVHRVANESNRSWVWWDYVTDFHVRCSMKEKKYSKDCAELVMKSLDLPIEKIKKCVGDPEADVENEVLKIEQTAQIGGGSRGDVTILPTLILNNVQYRGKLERTSVLKAICAGFKETTEPQVCLSGDIETNECLQRRNGGCWQDRSANVTACKDTFRGRVCECPVVEGVQYKGDGYTTCEAFGPARCSINNGGCWSETRNKITFSACSESKVNGCHCPDGFVGDGIKCKDIDECKEKSACQCDGCSCKDTWGGYDCKCKGDLLYIKEQDICIERNGSKFGKILAIVVIAVVAIAGLAGYIFYKYRLRSYMDSEIMAIMQCVRNARHNKHKRRLNVYLLRTFRGGGKNSVLLL 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09189 633 ProSitePatterns Calcium-binding EGF-like domain signature. 511 537 IPR018097 GO:0005509
Vifa1g09189 633 Gene3D Plasmodium vivax P25 domain 387 560 - -
Vifa1g09189 633 CDD EGF_CA 511 540 - -
Vifa1g09189 633 SMART egfca_6 511 553 IPR001881 GO:0005509
Vifa1g09189 633 Gene3D - 19 181 - -
Vifa1g09189 633 PANTHER PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 5 613 - -
Vifa1g09189 633 FunFam Vacuolar-sorting receptor 1 19 181 - -
Vifa1g09189 633 FunFam vacuolar-sorting receptor 1 404 461 - -
Vifa1g09189 633 Pfam PA domain 59 158 IPR003137 -
Vifa1g09189 633 SUPERFAMILY PA domain 89 166 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09189 Vifa-Chr1 1452691037 1452694825 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g09189 1 1452691037 1452694825 Vifa1g09189 1 1452691037 1452694825 ECH