Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04385 ATGGCTAAGAAGGCAGTGTTGATAGGGTGCAACTATCCAGGAACAAAGGCTGAGTTAAAAGGATGCATTAACGATGTGTGGAGGATGCAAGAATGTCTCATTCGCAATTATGGATTTTTAGATGAAGATATCACAGTTCTCATTGACACAGATCTTTCTTACACTCAACCTACCGGCAAGAACATTCGATTTGCCATGTCTAGGTTGCTTCAATCAGCTCAGCCCGGTGACGTGCTATTCGTCCACTATAGTGGTCATGGCACACGTCTCCCGGCCGAGACCGGAGATTACGATGATACTACTGGCTATGATGAGTGCATTGTTCCCTCAGATATGAATCTCATTACTGTACAATGTAATGCAATAAGCATTTGA 375 0.4347 MAKKAVLIGCNYPGTKAELKGCINDVWRMQECLIRNYGFLDEDITVLIDTDLSYTQPTGKNIRFAMSRLLQSAQPGDVLFVHYSGHGTRLPAETGDYDDTTGYDECIVPSDMNLITVQCNAISI 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04385 124 SUPERFAMILY Caspase-like 5 112 IPR029030 -
Vifa1g04385 124 Pfam Caspase domain 3 116 IPR011600 GO:0004197|GO:0006508
Vifa1g04385 124 Gene3D - 1 121 - -
Vifa1g04385 124 PANTHER METACASPASE-4 2 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04385 Vifa-Chr1 681913456 681913979 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04385 - - gmx:100802658 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04385 1 681913456 681913979 Vifa1g04385 1 681913456 681913979 ECH