Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00653 ATGGAGAAGAAAGCAACAGTCATGAACAGCCAACAATCACGAACCAATGGACGAAAATGGAGAAGAAAGCACCGATTTGAGATGAAGAATGAAGAAGAAAGGGAGAAGAACAAAGATGCAAGAAGAAGAGATCAAAGAAGAAAGGGATTGTTCCAGAAAAGACCAGAAAAGGGAAAGATGGTGGTGCTGTCATCGGAGGATGACTTCGACGAGGAGCCCGGCGAGGTTATTGAATCAGCGCCGCCGCAGAAGGTGGGAGAAGAGAGGCAACTCAGAGGTCTCAAGAAGAAGCTTCTCAGACACGGACACGGCTGGGAAACCCCCAACTTCAACGACGTCGTAACAGTTATCAATGCAGTTCACCGTGTTGGGACATTGCTCGATGGAGCGGCGTTGGGTTCTTCCACTTGGGACACGGATCAACCCTTGACGTTTACTCTTGGCAATGATGATGTTCCTGGGTTGGACCGTGGGATTACGAGTATGAAGAAAGGGGAGGTGGCATTGTTCACATTACCTGCAGATGATGAAGGTGATGTTTGGCGTGATTCCGACTCTGTTGTGCAGTTTGAGGTGGAACTCCTTTCGTGGATCAGAGTAGTGGATGTGTGCAAAGATGGAGGCGTTATTAAGAAAATTGTGGAGCAGGGGAGTGGGAACGACCGCCCTTCTGATCTCGATGAAGTGCTTGTGAAGTATCAGGTGGCACTAGTTGATGGTACTGTTGTTGAAGAGACACCTGAAGGAGGAGTTGAGTTTTACGTGAAGGATGATGCCTTTGGGGAGACAGGAAGAGATTCTGGAACTGGGCTCTGTCGAATCCCTCCAAATTCAGTACTGCATGCTAATATTGAATTGGTGTCCTTCAAGCCTGTGATAAATGTTACTGGTGACTCCAAGGTGCTTAAAAAAATATTGAAAGAAGGGGAGGGTGCTTTCACAGCCAATGAGGATGCACATGTTACTGTCAGCTTCACAGCTATGCTAGAAGATGGCACGGTATTTGAGAAAAGGAGAACTGGTGAAGAACAACCCTTGGAATTCATAACTGATGAGGAACAAGTGATTGTTGGTCTAGATCGAGCTGTGGCAACTATGAAGAAGGGTGAGAGGGCCATTATTTCCATACATCCTGAGTATGCATTTGGAAATGTTGAAGTGAAACGAGATCTTGCTATTGTTCCACCAGGCTCAAATGTAGTCTATGACGTTGAGATGCTGGATTTTATCAAGGAGAAAGCACCATGGGAATTGAATAGTAAGGAGAAAATTGAGGTGGCTGGGAGGAAGAAAGAAGAAGGAAATGTACTATTTATAGGTGGCAATTACCTCCGAGCACAGAAGAAGTATGAACAGGCGGTTGATTTTCTTAGTGACGATGGATCCTTCGGGTATAGTGAGCAAAAGCAAGCCGATGCACTGAGAGTGTCATGCTGGTTGAATAGTGCAACTTGTAGCCTTAAACTTAATGACTTTAGTGGAGCAATCAAGCTATGTTCGCAGGTGCTTGATGTTGAATTTTGCAACGTGAAGGCTTTGTACAGACGAGCACAAGCATATATAGAAACTGGAGACTTCGTATTAGCAGATGTAGACATCAAGAAAGCTCTTGTGGCGGACCCACAAAACAGGGAGGTAAAGATAATTCAAAAGAAATTGAAGCAACTTCAAGCTGACAAAGACAAAAAAGATGCGAAGCTATACGAAAACATGTTTGCGTGTAAAACAAAGGACTCGTCTACGGCTATAAAGAGATTGAAGGTTGAGAAAGACGAGAGGGAAAACGAAGATGGAGCAAGAATGGAAGAGGACACAGTTGCTGATAGCGCAGTGATTTAA 1839 0.4486 MEKKATVMNSQQSRTNGRKWRRKHRFEMKNEEEREKNKDARRRDQRRKGLFQKRPEKGKMVVLSSEDDFDEEPGEVIESAPPQKVGEERQLRGLKKKLLRHGHGWETPNFNDVVTVINAVHRVGTLLDGAALGSSTWDTDQPLTFTLGNDDVPGLDRGITSMKKGEVALFTLPADDEGDVWRDSDSVVQFEVELLSWIRVVDVCKDGGVIKKIVEQGSGNDRPSDLDEVLVKYQVALVDGTVVEETPEGGVEFYVKDDAFGETGRDSGTGLCRIPPNSVLHANIELVSFKPVINVTGDSKVLKKILKEGEGAFTANEDAHVTVSFTAMLEDGTVFEKRRTGEEQPLEFITDEEQVIVGLDRAVATMKKGERAIISIHPEYAFGNVEVKRDLAIVPPGSNVVYDVEMLDFIKEKAPWELNSKEKIEVAGRKKEEGNVLFIGGNYLRAQKKYEQAVDFLSDDGSFGYSEQKQADALRVSCWLNSATCSLKLNDFSGAIKLCSQVLDVEFCNVKALYRRAQAYIETGDFVLADVDIKKALVADPQNREVKIIQKKLKQLQADKDKKDAKLYENMFACKTKDSSTAIKRLKVEKDERENEDGARMEEDTVADSAVI 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00653 612 FunFam Peptidylprolyl isomerase 415 570 - -
Vian7g00653 612 MobiDBLite consensus disorder prediction 1 15 - -
Vian7g00653 612 MobiDBLite consensus disorder prediction 585 612 - -
Vian7g00653 612 SUPERFAMILY FKBP-like 69 199 - -
Vian7g00653 612 SUPERFAMILY TPR-like 421 572 IPR011990 GO:0005515
Vian7g00653 612 SUPERFAMILY FKBP-like 296 427 - -
Vian7g00653 612 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 119 175 IPR001179 GO:0003755
Vian7g00653 612 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 314 407 IPR001179 GO:0003755
Vian7g00653 612 SUPERFAMILY FKBP-like 183 290 - -
Vian7g00653 612 Coils Coil 23 48 - -
Vian7g00653 612 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 318 410 IPR001179 GO:0003755
Vian7g00653 612 Gene3D Tetratricopeptide repeat domain 413 570 IPR011990 GO:0005515
Vian7g00653 612 Coils Coil 546 566 - -
Vian7g00653 612 MobiDBLite consensus disorder prediction 25 60 - -
Vian7g00653 612 Gene3D - 201 259 IPR046357 GO:0003755
Vian7g00653 612 ProSiteProfiles TPR repeat profile. 510 543 IPR019734 GO:0005515
Vian7g00653 612 SMART tpr_5 510 543 IPR019734 GO:0005515
Vian7g00653 612 SMART tpr_5 427 460 IPR019734 GO:0005515
Vian7g00653 612 SMART tpr_5 476 509 IPR019734 GO:0005515
Vian7g00653 612 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 115 175 IPR001179 GO:0003755
Vian7g00653 612 PANTHER PEPTIDYLPROLYL ISOMERASE 294 598 - -
Vian7g00653 612 FunFam Peptidylprolyl isomerase 291 412 - -
Vian7g00653 612 MobiDBLite consensus disorder prediction 1 60 - -
Vian7g00653 612 MobiDBLite consensus disorder prediction 585 604 - -
Vian7g00653 612 Gene3D - 89 200 IPR046357 GO:0003755
Vian7g00653 612 Gene3D - 292 412 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00653 Vian-Chr7 14626521 14637024 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00653 84 573 Calmodulin-binding Proteins AT3G25230 51.048 2.48e-160 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00653 K09571 - gmx:100798382 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00653 7 14626521 14637024 Vian7g00653 7 14626521 14637024 ECH