Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00639 ATGGATCTTGGGGTGGTGGGTTTGGAGGGGTTGGTGGGTTCAGACAGCAGTTGCGCCTTTGGTTCTTCTCTTGCTTCAGATCCTGAGACAAAACACAAGTGGTACGGATCTGGGGTGCTCAAGCAAGAGAGATCTGGCACAGCAAGTGAAGATGAGTGGAGGACTTCAAAAGTGCCTAAAACTGATGACAACATGTCTGCTGCATCCAAAGCAATGCTCTTTCATCAGAGAAACTCTCTGCTGAGATCTAATGTCACCCTTTTCTCTGAGGGCCACAACCAACCACAAATGCTGAGTTTTTCTTCACCAAAATCAGAGCCTTTGATGGTGGACAAGGCCTCCTTAAATGCCACATTGCCTTTTTCTTACCACCAATTGTCTAGTTACAGCAGAAATACAGGTTACAGTTCGGGAAGCATAAGCATGCATGGGGCTTTGGCTGGTGTGAGAGGGCCATTCACGCCTTCGCAGTGGATGGAACTTGAACACCAAGCTTTGATCTACAAGTACATCACAGCAAACGTGCCTGTACCAACTCATCTTCTCATACCCATCAGAAAAGCACTCGATTCTGCTGCCTTCTGCAACTTTTCAACCGGCCTCCTCAGACCCAACACATTGGGATGGGGAGGTTTCCATCTGGGATTCTCGAACAACACAGACCCTGAGCCAGGGAGGTGTAGGAGAACAGATGGGAAGAAATGGCGGTGCTCGAGAGATGCCGTAGTTGATCAGAAGTATTGCGAGCGGCACATGAACAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCCTCACCACCACTACCACCACAACAACCACCACTACTCCTAATGCTTCCTCAAACTCCATTGTGGTGCCCGGCGGCAACAACAACAACACCTTTGCACACAACAATGTGCACCACCCTCTTCCATCTCATTCCTCTCCAGCCAACACCATCAATAGGATGTTTATGAGTAGCAAAGAGAACAGTAACAACGCTAGTGAGAGGATGCAGGATGGCCCTGCGCTTCCCATGGTGCCTCCAACTCTTGAGCTGAAACCAAAGGACCCTTTCATGATTCATAAACACCAACTCCCATATGATGAATCTTCCTCAAGGAACAACAATGAGTTTGGGCTTGTCACTTCTGATTCCTTGCTCAACCCTTCACAGAAGAGAAGCTTTGGTTCATCATCTTCACAAAAGGATGATTCTGAGTCCCAACAACAACATTCTCTCAGGCACTTCATCGATGACTCTCCAAAACCACAGTCTCATCATCACCATCACCATCACCGTTCTTCTGTTTGGCCTGAACTTGACAACATGCAGTCAGATAGGACTCAGTTGTCGATCTCCATACCGATATCTTCCTCAGATTTCATGTCATTCACTACCTCCTCACCCTCTAATGAGAAACTCACACTGTCACCACTAAGGCTTTCAAGGGAGATAGACCCTATTCAAATGGGGTTGGGAGTGGGAAGTGGTGCTCCCAATGAGTCAAACACCAGGCAAGCCAATTGGATTCCAATCACTTGGGAGAGTTCTATGGGTGGCCCTCTTGGTGAGGTTTTGAACCTGAGTAGTACTAATAACAACAGCAATGGAAGTGATCACTGTGGCAAGAACACTTCTGCTCTCAACCTCATGAAAGATGGGTGGGACAATAGTCCTCCACTAGGGTCATCTCCAAATGGGGTGTTGCAAAAAACAGCATTTGGATCACTTTCCAATAGCAGTGCTGGAAGCAGTCCAAGGGCAGAGAACAACAACATCAAAGAAGGTGCCAGTGCCACCACACTGTGCAATGCCTTGTGA 1824 0.4797 MDLGVVGLEGLVGSDSSCAFGSSLASDPETKHKWYGSGVLKQERSGTASEDEWRTSKVPKTDDNMSAASKAMLFHQRNSLLRSNVTLFSEGHNQPQMLSFSSPKSEPLMVDKASLNATLPFSYHQLSSYSRNTGYSSGSISMHGALAGVRGPFTPSQWMELEHQALIYKYITANVPVPTHLLIPIRKALDSAAFCNFSTGLLRPNTLGWGGFHLGFSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHALTTTTTTTTTTTPNASSNSIVVPGGNNNNTFAHNNVHHPLPSHSSPANTINRMFMSSKENSNNASERMQDGPALPMVPPTLELKPKDPFMIHKHQLPYDESSSRNNNEFGLVTSDSLLNPSQKRSFGSSSSQKDDSESQQQHSLRHFIDDSPKPQSHHHHHHHRSSVWPELDNMQSDRTQLSISIPISSSDFMSFTTSSPSNEKLTLSPLRLSREIDPIQMGLGVGSGAPNESNTRQANWIPITWESSMGGPLGEVLNLSSTNNNSNGSDHCGKNTSALNLMKDGWDNSPPLGSSPNGVLQKTAFGSLSNSSAGSSPRAENNNIKEGASATTLCNAL 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00639 607 MobiDBLite consensus disorder prediction 560 596 - -
Vian7g00639 607 SMART QLQ_2 151 187 IPR014978 GO:0005524|GO:0005634|GO:0006355
Vian7g00639 607 MobiDBLite consensus disorder prediction 45 59 - -
Vian7g00639 607 Pfam WRC 222 264 IPR014977 -
Vian7g00639 607 MobiDBLite consensus disorder prediction 551 596 - -
Vian7g00639 607 MobiDBLite consensus disorder prediction 408 425 - -
Vian7g00639 607 MobiDBLite consensus disorder prediction 370 407 - -
Vian7g00639 607 PANTHER GROWTH-REGULATING FACTOR 5 90 468 IPR031137 GO:0005634|GO:0006351|GO:0032502
Vian7g00639 607 MobiDBLite consensus disorder prediction 366 440 - -
Vian7g00639 607 Pfam QLQ 152 186 IPR014978 GO:0005524|GO:0005634|GO:0006355
Vian7g00639 607 MobiDBLite consensus disorder prediction 43 62 - -
Vian7g00639 607 ProSiteProfiles QLQ domain profile. 152 187 IPR014978 GO:0005524|GO:0005634|GO:0006355
Vian7g00639 607 MobiDBLite consensus disorder prediction 266 338 - -
Vian7g00639 607 MobiDBLite consensus disorder prediction 250 354 - -
Vian7g00639 607 ProSiteProfiles WRC domain profile. 221 265 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00639 Vian-Chr7 14474318 14478064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00639 41 597 GRF Transcription Factor Family AT2G22840 42.734 8.86e-109 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Vian7g00639 WRC 5.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00639 - - gmx:100818860 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00639 7 14474318 14478064 Vian7g00639 7 14474318 14478064 ECH