Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00637 ATGAAGTCGATGAATGATGGCAACGCTGATGATGGGAACAATCATAACTGGTTGGGGTTCTCTCTCTCACCCCACATGAAAATGGAAATTACTTCTTCTGCTGACCCTCCCCATCATCACCATCATCACTTCTATCATCACCCTCAGGTTTCTGCAGCTGCAGCACCTTGCAACACTGTTCCTACAGGCTTTTATATTTCCCCTTCACACCTTAACCCCTCAGGAATCTGCTATGGCGTTGGAGAAAACGGTGCCTTTCACCCTCCCTTGGCCATGATGCCCCTCAAGTCAGATGGCTCACTTTGCATTATGGAAGCTCTCACCAGGTCACAAACCCCAGGGTTTTGTGGTCTTGTTGAAGTGATGGTGCCAACCACATCCCCAAAACTGGAGGACTTCCTTGGTGGTGCAAGTATGGGAGCTCAAGAGTATGGAGGGCATGAAAGAGAAGCAATGGCTCTGAGCCTTGACAGCGTCTACTATAGCAGCCAGAATGCGGAACCTGAAGCCAACAGAGGCCATCCTTCTTCTCTGGGCCTTCTTTCTGACCCCTTCAGGCAACAAACCCACCCATATTACTCTGGGCTTGGGATTTACCATGTGGAGGAGGAAGCCAAGCAACCACACGTGACAGTTTGCAGCTCCCAAATGCCTCAAGTGGTGGAAGAAGGTGTTGCTTGCTTCAAAAACTGGGTGCCACCAAGGGGATATTCTTCCACTCAACAGAATCCGGAGCAGCAGCAAGTGAATAATAGCAGTGGCATGGGGGAGGGTCACGGTACTTCTGGGAATGCTGGTGTTGGTTGTGGGGAGTTGCAGTCTTTGAGTTTGTCTATGAGTCCTGGTTCTCAGTCTAGCTGTGTCACAGTTCCAACTCAGATCTCATCTTCCAGAACTGAATCAGTAGCTGGGGATGCCAAAAAGAGAGGCTCTGCTAAGCTTGGCCAGAAGCAACCTGTGCATAGGAAATCCATTGACACATTCGGCCAGAGAACTTCTCAGTATAGAGGAGTGACAAGGCATCGATGGACTGGAAGATATGAAGCACATTTGTGGGATAATAGTTGCAAGAAGGAAGGGCAAACCAGGAAAGGACGACAAGGTGGCTATGATATGGAAGAGAAAGCTGCAAGAGCATATGATCTTGCGGCTCTCAAGTATTGGGGACCTTCAACTCACATAAACTTCCCGCTAGAAAATTACCAAACTGAACTCGAAGAAATGAAGAATATGAGCAGGCAGGAGTATGTGGCCCACTTGAGAAGAAAGAGTAGTGGGTTTTCAAGGGGTGCATCAATGTACAGAGGAGTGACAAGGCACCACCAACACGGTAGGTGGCAAGCAAGGATAGGCAGAGTTGCAGGAAATAAGGACCTTTATCTTGGGACATTCAGTACTCAAGAAGAAGCAGCTGAGGCATATGACGTAGCTGCAATCAAATTTCGTGGGGTGAATGCTGTTACCAACTTCGACATCTCAAGATACGATGTTGAGAGGATCATGGCCAGCAACACCCTTCTTGCTGGAGAGTTGGCTAGAAGAAACAAGGAAAGTGAGCCAAGAACTGAGGCCGTAGAGTACAACGGTGTGTCAAGCCAACAAGAAGCTGAGACTGTGAACAACAATGAGAACAATGAGAAGGGATCATCGGATTGGAAGATGGGTTTGTATCATCAGCAACAGCAACAGTCAAACAACAACTGTGACATGAAAACCATGAAGTGTGGAAATTATAGAGGTTCTGCTTTCTCTGTGTCCCTACAAGATCTCATTGGGATTGACTCAGTAGGATCTAGCCAGGCCATGCTAGAGGAGTCTACTAAGATAGGTGCTCATTTTTCAAACCCCTCCTCGCTGGTCACCAGTTTAAGCAGCTCAAGGGAAGGTAGCCCTGACAAAACGGGTCCCACCATGCTCTTTCCTAAGCCTCCGGTGGGGTCAAAGGTTGTCACCAGCCCTATTGCTAATGGTGTGAGTGTTAGCTCATGGTTTCCCTCTCAAATGAGGCCAGTCTCTATGTCACACTTGCCAGTTTTTGCTGCTTGGAGTGATACCTAG 2058 0.4815 MKSMNDGNADDGNNHNWLGFSLSPHMKMEITSSADPPHHHHHHFYHHPQVSAAAAPCNTVPTGFYISPSHLNPSGICYGVGENGAFHPPLAMMPLKSDGSLCIMEALTRSQTPGFCGLVEVMVPTTSPKLEDFLGGASMGAQEYGGHEREAMALSLDSVYYSSQNAEPEANRGHPSSLGLLSDPFRQQTHPYYSGLGIYHVEEEAKQPHVTVCSSQMPQVVEEGVACFKNWVPPRGYSSTQQNPEQQQVNNSSGMGEGHGTSGNAGVGCGELQSLSLSMSPGSQSSCVTVPTQISSSRTESVAGDAKKRGSAKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQTELEEMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGVNAVTNFDISRYDVERIMASNTLLAGELARRNKESEPRTEAVEYNGVSSQQEAETVNNNENNEKGSSDWKMGLYHQQQQQSNNNCDMKTMKCGNYRGSAFSVSLQDLIGIDSVGSSQAMLEESTKIGAHFSNPSSLVTSLSSSREGSPDKTGPTMLFPKPPVGSKVVTSPIANGVSVSSWFPSQMRPVSMSHLPVFAAWSDT 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00637 685 MobiDBLite consensus disorder prediction 616 632 - -
Vian7g00637 685 MobiDBLite consensus disorder prediction 280 322 - -
Vian7g00637 685 CDD AP2 333 397 IPR001471 GO:0003700|GO:0006355
Vian7g00637 685 SUPERFAMILY DNA-binding domain 333 399 IPR016177 GO:0003677
Vian7g00637 685 ProSiteProfiles AP2/ERF domain profile. 334 397 IPR001471 GO:0003700|GO:0006355
Vian7g00637 685 FunFam AP2-like ethylene-responsive transcription factor 432 493 - -
Vian7g00637 685 MobiDBLite consensus disorder prediction 236 259 - -
Vian7g00637 685 CDD AP2 432 493 IPR001471 GO:0003700|GO:0006355
Vian7g00637 685 ProSiteProfiles AP2/ERF domain profile. 433 491 IPR001471 GO:0003700|GO:0006355
Vian7g00637 685 MobiDBLite consensus disorder prediction 236 267 - -
Vian7g00637 685 MobiDBLite consensus disorder prediction 280 301 - -
Vian7g00637 685 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 126 564 - -
Vian7g00637 685 PRINTS Ethylene responsive element binding protein signature 335 346 IPR001471 GO:0003700|GO:0006355
Vian7g00637 685 PRINTS Ethylene responsive element binding protein signature 473 493 IPR001471 GO:0003700|GO:0006355
Vian7g00637 685 SMART rav1_2 334 403 IPR001471 GO:0003700|GO:0006355
Vian7g00637 685 SMART rav1_2 433 497 IPR001471 GO:0003700|GO:0006355
Vian7g00637 685 FunFam AP2-like ethylene-responsive transcription factor ANT 333 399 - -
Vian7g00637 685 MobiDBLite consensus disorder prediction 531 551 - -
Vian7g00637 685 Pfam AP2 domain 334 389 IPR001471 GO:0003700|GO:0006355
Vian7g00637 685 Pfam AP2 domain 434 483 IPR001471 GO:0003700|GO:0006355
Vian7g00637 685 SUPERFAMILY DNA-binding domain 432 493 IPR016177 GO:0003677
Vian7g00637 685 MobiDBLite consensus disorder prediction 616 644 - -
Vian7g00637 685 Gene3D AP2/ERF domain 333 399 IPR036955 GO:0003700|GO:0006355
Vian7g00637 685 Gene3D AP2/ERF domain 433 493 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00637 Vian-Chr7 14401967 14405520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00637 414 685 AP2-EREBP Transcription Factor Family AT4G37750 27.303 2.97e-15 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Vian7g00637 AP2 4.8e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00637 K09285 - gmx:100798179 1080.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00637 7 14401967 14405520 Vian7g00637 7 14401967 14405520 ECH
Vian7g00637 7 14401967 14405520 Vian4g02164 4 38495133 38498255 PCT