Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00635 ATGGGGGGTCAGGAAAATGCCATGGGGTTTCAACACGGAAATGAGAACATTCTGACTTGTCCATCTTCAGGTCTCAGTGTTGCCAATGTTAATGTTTCAGAAATGGCTATTAGTTCCGTGTCTATGGCCAAGCCTTCTGATGTTGCTAACCCTTTTCTTGCTTCTTCCGCTTGGGATCCACTTGTTTCCTTGAGTCAGGCTCAAACTTTTGGAGGCTCCTCAATGGTTTCTCATACCGACTTTGCCAATGCCAACTCTTCTTACCCTCTTGTTCTGGAAAACCAAGGAATTACCAACACTTCCCACCTTGTTCAATACATGTCTGACTCAAATCTAGGGGGCATGGTCCCCAAGGTTCACTCCTATGCAAGCAGGGGCTTCTCAGAAATGGTTGGTGCTGCCTCTTTTGTCCAGCATGGGTCTGCTGATGTGGCTAACTCAGGGTACCCACCACATTATAATCCGATCAAGGACACTCAGATTAATGGTGAACAATCTCAGGTTGAGGATTCAATTCCTGAAGAGGAAGCACCAGGATCTGGTCCTAGTGGGAATAGAAGAAAGAGAGGGCTTGATCATAATTCTACCTTCAGCCCAAATAAGAATGCTGAGAGTGAAACTGTGAAAGATTCTCCGGGGAGGGCCTGTGATGGTCCAAAAGAACATGAAAAGAAGCCAAAAGTTGAGCAGAACAACAGTGCAGATTTGCGTGGCAAGCAATCAGCGAAGCAAGCTAAGGACAACAGTTCTCAAAGTGGAGAAGCTCCTAAAGAAAACTTCATTCACGTGAGAGCTAGAAGAGGACAAGCCACAAACAGCCACAGTCTTGCAGAAAGAGTGAGAAGAGAAAAGATTAGTGAGCGAATGAGGCTGCTTCAAGAACTTGTTCCTGGTTGCAACAAGATAACTGGCAAAGCCGTAATGCTGGATGAGATAATAAACTACGTGCAATCACTTCAGCAACAGGTTGAGTTTTTGTCCATGAAACTTGCCACAGTGAACCCAGAACTAAACTTTGATGTAGACAGGATTATATCCAAGGATATTCTTCAATCACGCATAGGACATGGAATTAGTGCATATGGTCCTGGTATCAATTCCTCTCACACATTCCCCAGTGGAAATTTCCATGGAACATTGGCTGGCATGCCTAGTACATCATCACAATTCCCTCCTTTGCCCCAGAATGTTTTGGACCATGAGTTCCAAAGCTTCTATGGAATTGGATACGATTCTAATACAGCACTTGACAACTTGGGACCCAATGGGCGGTTGAAAACAGAGTTATAG 1290 0.4473 MGGQENAMGFQHGNENILTCPSSGLSVANVNVSEMAISSVSMAKPSDVANPFLASSAWDPLVSLSQAQTFGGSSMVSHTDFANANSSYPLVLENQGITNTSHLVQYMSDSNLGGMVPKVHSYASRGFSEMVGAASFVQHGSADVANSGYPPHYNPIKDTQINGEQSQVEDSIPEEEAPGSGPSGNRRKRGLDHNSTFSPNKNAESETVKDSPGRACDGPKEHEKKPKVEQNNSADLRGKQSAKQAKDNSSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVDRIISKDILQSRIGHGISAYGPGINSSHTFPSGNFHGTLAGMPSTSSQFPPLPQNVLDHEFQSFYGIGYDSNTALDNLGPNGRLKTEL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00635 429 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 167 373 IPR024097 GO:0006355
Vian7g00635 429 MobiDBLite consensus disorder prediction 233 256 - -
Vian7g00635 429 FunFam Basic helix-loop-helix transcription factor 266 338 - -
Vian7g00635 429 Gene3D - 266 340 IPR036638 GO:0046983
Vian7g00635 429 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 269 319 IPR011598 GO:0046983
Vian7g00635 429 CDD bHLH_AtBPE_like 259 344 - -
Vian7g00635 429 MobiDBLite consensus disorder prediction 146 259 - -
Vian7g00635 429 Pfam Helix-loop-helix DNA-binding domain 272 320 IPR011598 GO:0046983
Vian7g00635 429 SMART finulus 275 325 IPR011598 GO:0046983
Vian7g00635 429 MobiDBLite consensus disorder prediction 207 232 - -
Vian7g00635 429 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 267 337 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00635 Vian-Chr7 14369877 14372299 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00635 1 429 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 41.743 4.07e-82 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vian7g00635 HLH 4.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00635 - - gmx:100801930 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00635 7 14369877 14372299 Vian7g00635 7 14369877 14372299 ECH