Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00622 ATGGACTTAAGACAACAAGTCTTATTCACCACGAATGTTGAGATGTTCACTTTCGATGAGGGTGGTGTGACATCGGCGAACCTACAAAGACACTTTAACACTCAAGTAGATTTGTATCACAACAATGACACATGTATCCTTTACTTTGTGGTGCAAGTTGAGGTGTCCTCAACCATTTGGGGGTTGACATGTACTGGTCGAGAGTCTTGTCGAAGTGTCTTCGATCTCTTAGGATTCATCGATTCCCATCTTGTTCTAGATAAGGAAAGCCTCGACAATGTCGTGTTTGTGGACAAGCTCTCGTCATCGGCGGCGAAACCCTTGTCGCAGTCATTGAAACCAAGCTCCTGGCGCTGGCGAAACCCTATTGTGGCCGACAAAGCCCTATTGTCGTCCCCAACAAAGGCTCAGACGAAGCTCCAAATGAAACCCTATTATAAAGCCGCTCTGAAGCTTTCAATTAAGTGTTTTCCTTTGTTGGCTACAGATGTTGAATCATTGAGGCACTACTCTAGAATTCAACCCCCAAGGCCTGTTTCTGTTAAACCAGTAATCAGAGTATCTAACAATATTGCTCGCCTGGATGCTCCTAAAAAAGGTCCAAAACCCAGACAGCTGTTATCATTGCCTCCTTTTCCTGGCCACCCCTTGCCTGCCAAGAGCTCAAATAGTGGTCCTGGACAGCGTGATTATGTTACTGCTGTCAATTGGATTAAGTATTACTTCAAGGGTATATGGGGTTCTGTCATTGAATCCCATTTCAGAGAGGGTCTTGTGCAAATGGAGGGCCTAGTTGCTGCTGACTCTTACACTCGGAAAGATACTCTGATGAAATCCATGCGAAAGATTAGACCTAATGAAGTGATGGAACATGGTGCCAGAGTTCACGTTCCTGTATCAATTGCTGAGACTAGGATTTCCAAAAGATATGATGCTATTCCTTGTGGAACACTATATCCAAATGCTGACGAAATTAAGTATCTGCAAAGGCTTGTGATTTACAAGGGGAGTTTACCAGTTCACAATAGCATGGACGCATTGGCAGCTGCTGCACTGTCCTATGATTATGATGAGGGCCCTAAACTAGTGCTTCTAAATGATGGGAAGACTGAGAGGATAATACTAGCTCACCATTCAAGTGTAGAACCACGCCAAGAGGCTGTAACTGAGTATCGGGTGCTTGGTCCAAAGATAAATGGATGCTCGTGGGTGGAGCTACGTCCTCTTACTTACAGGAAACATCAGTTGCGCGTCCATTGCGCTGAAGCACTTGGCACACCAATAGTGGGTGACTACAAGTATGGCTGGTTTGTGCACAGCCGATGGAAACAAATGCCGCGAATCGATATCGAGCCAACAACTGGAAAACCATACAAGTTGCGTAGGCCAGAAGGCCTTGATGTTCAGAAGGGAAGTGTTTTATCGAAGGTTCCTCTATTGCATCTTCACTGCAGAGAACTTGTGCTCCCCAACATCGCTAAGTTTCTACAAGTTTTGAACAATAGTTCAGAAGAACTACAGAGTTCACTCAGCCAGCAGCCTGATGTTCTTCGATTTGTGGCAACAATGCCATCCCACATGAGAATTAGTTGGAATCTTATGTCATCATATTTAGTCTGA 1620 0.4475 MDLRQQVLFTTNVEMFTFDEGGVTSANLQRHFNTQVDLYHNNDTCILYFVVQVEVSSTIWGLTCTGRESCRSVFDLLGFIDSHLVLDKESLDNVVFVDKLSSSAAKPLSQSLKPSSWRWRNPIVADKALLSSPTKAQTKLQMKPYYKAALKLSIKCFPLLATDVESLRHYSRIQPPRPVSVKPVIRVSNNIARLDAPKKGPKPRQLLSLPPFPGHPLPAKSSNSGPGQRDYVTAVNWIKYYFKGIWGSVIESHFREGLVQMEGLVAADSYTRKDTLMKSMRKIRPNEVMEHGARVHVPVSIAETRISKRYDAIPCGTLYPNADEIKYLQRLVIYKGSLPVHNSMDALAAAALSYDYDEGPKLVLLNDGKTERIILAHHSSVEPRQEAVTEYRVLGPKINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRIDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLQVLNNSSEELQSSLSQQPDVLRFVATMPSHMRISWNLMSSYLV 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00622 539 MobiDBLite consensus disorder prediction 194 227 - -
Vian7g00622 539 Gene3D Pseudouridine synthase 264 497 - -
Vian7g00622 539 SUPERFAMILY Pseudouridine synthase 305 492 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Vian7g00622 539 PANTHER MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE 365 534 - -
Vian7g00622 539 Pfam RNA pseudouridylate synthase 369 421 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00622 Vian-Chr7 14129740 14139719 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00622 - - gmx:100817786 344.739