Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00620 ATGGATTTCATGAAGGTCTTCGATCAAACCGTTCGAGAAATAAAGAGAGAGGTAAATCTGAAGGTGCTTAAGGTTCCGGAAATCGAACAGAAGGTGCTCGATGCAACTGACAATGAACCTTGGGGTCCTCATGGTACTGCACTGGCAGAGATTGCACAGGCTACCAAAAAATTTACTGAATGTCAAATGGTCATGAATGTCCTCTGGACAAGACTGGGCGAAACTGGAAAAGACTGGAGATATGTATACAAGGCGTTGGCGGTTATAGAGTATTTGGTAGGACATGGATCTGAACGTGCAGTTGACGACATTATAGAACATACTTTTCAGATTTCAGCACTTTCTAGTTTTGAATATGTTGAGCCAAGTGGGAAGGACGTAGGACTCAATGTAAGGAAGAAGGCTGAAAACATTGTGTCCCTTTTGAATGATAGGGATAAGATACATGATGTCAGAAATAAAGCTGCTGCAAACCGTGACAAGTACATTGGAGTTTCTTCTAGTGGTATCACATACAAGTCTGGTGGGTCAGCCTCTTATAGTAGTGGCGGCATCTCTCAGAGCAGTGGTAAGTATGGAGGCTTTGGATCTAGAGATGGTGACAGGTTTAGTGATAACAATAGAGACAAGGGGGGATCCTATGATGAAGATTACCATGGAAAATCACACCATACTGTTGCAAGTGACAATCAAGACAACTCCTTCAAGAAGGGTTCATCACGATCTGTCAGCAAAAGTCCGGAAAACAAGTCATCTAGAGTATCAAAGTCATCAACTAATGCAAATAATTATGGTTCAGTACCTTCTCAAAGTTCAAGTGTACCTGAAAATAGTACTGAGGATGACATGGATGATTTTGATCCAAGAGGAACTTCTACCAAAACTTCGGCAGGAAACTCTAACCAAGTTGATCTCTTTGAACAAGATTTAATTGGTGACTTCATGGATGCTCCAACATCTGTTCCTGTAGAGAAGCCAGCAACTGGTAATTTGCCAGAGGTTGATCTTTTTGCAGATGCATCATTTGTATCTGCAACACCTCAAATGGACAAAGGAGCTAGTTCTCAACCACAGGCTGAGGTGGATCTATTTGCTTCACAACCCGCTATTTCTACAGTTACACCAACAGTTGACTTGTTTTCCATTCCTGAACCGGTAGTGCAGCCAGATAGCAAGCCAGAGAAATCTGGTCCTGTGGATAACAGCTCGTTTGATCCATTTGCTGCTGTTCCTCTTAATAATTTTGATGGGTCTGATATTTTTGGTGATTTTACTTCTCAATCTGATTCGTTGTCTTCCCAGCCCTCCAATAATGTTGTCAATGATGACAAACATGATAATATCGCTGGTAAATCATTAGCAGACTCTAAACTTCCAGCTAAAAAGGATACTTTCCAGGTGAAGTCTGGTGTCTGGGCTGATTCACTAAGCCGCGGACTGATTGATCTCAATATAACTGCCCCTAAAAAAGTATCCCTTGCGGATGTTGGGATTGTGGGTGACTTGAGCGATGGATTTGACGGAAAGGAGAAAGGCCCTCCACCTTCATTTTATATGGGGAGAGCTATGGGTTCAGGTTCAGGAAGTATTGGACTCGGTAGGTCTGGATTCACTCCTTCACAACCAGCACCTGGAGACGACATATTCTCAAACCTTGGCTCCCAACAATATCAATTCGGTGGGTTCCAGAAGTAA 1695 0.426 MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDNEPWGPHGTALAEIAQATKKFTECQMVMNVLWTRLGETGKDWRYVYKALAVIEYLVGHGSERAVDDIIEHTFQISALSSFEYVEPSGKDVGLNVRKKAENIVSLLNDRDKIHDVRNKAAANRDKYIGVSSSGITYKSGGSASYSSGGISQSSGKYGGFGSRDGDRFSDNNRDKGGSYDEDYHGKSHHTVASDNQDNSFKKGSSRSVSKSPENKSSRVSKSSTNANNYGSVPSQSSSVPENSTEDDMDDFDPRGTSTKTSAGNSNQVDLFEQDLIGDFMDAPTSVPVEKPATGNLPEVDLFADASFVSATPQMDKGASSQPQAEVDLFASQPAISTVTPTVDLFSIPEPVVQPDSKPEKSGPVDNSSFDPFAAVPLNNFDGSDIFGDFTSQSDSLSSQPSNNVVNDDKHDNIAGKSLADSKLPAKKDTFQVKSGVWADSLSRGLIDLNITAPKKVSLADVGIVGDLSDGFDGKEKGPPPSFYMGRAMGSGSGSIGLGRSGFTPSQPAPGDDIFSNLGSQQYQFGGFQK 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00620 564 MobiDBLite consensus disorder prediction 174 193 - -
Vian7g00620 564 Pfam ENTH domain 27 147 IPR013809 -
Vian7g00620 564 SMART enth_2 26 152 IPR013809 -
Vian7g00620 564 PANTHER EPSIN/ENT-RELATED 4 536 - -
Vian7g00620 564 SUPERFAMILY ENTH/VHS domain 7 152 IPR008942 -
Vian7g00620 564 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
Vian7g00620 564 Gene3D - 19 165 IPR008942 -
Vian7g00620 564 MobiDBLite consensus disorder prediction 227 277 - -
Vian7g00620 564 MobiDBLite consensus disorder prediction 426 443 - -
Vian7g00620 564 MobiDBLite consensus disorder prediction 174 303 - -
Vian7g00620 564 MobiDBLite consensus disorder prediction 426 452 - -
Vian7g00620 564 MobiDBLite consensus disorder prediction 201 226 - -
Vian7g00620 564 FunFam Clathrin interactor 1 18 165 - -
Vian7g00620 564 CDD ENTH 28 144 - -
Vian7g00620 564 MobiDBLite consensus disorder prediction 529 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00620 Vian-Chr7 14112156 14119005 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00620 K12471 - gmx:100809198 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00620 7 14112156 14119005 Vian7g00620 7 14112156 14119005 ECH