Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00610 ATGGCCACCGCCACTTCTCTTTCCACGCTCTTCCTTCTCTTCCTCGCAACCGTCGCTCTTGTTGCTGCTCGCCGTGACCTCGTCGGAGACTTCCTCCGACTGCCGTCCGATTCCGGTAACGATGACAACGTCCAGGGGACGCGCTGGGCCATCCTCTTCGCCGGTTCGAACGGCTATTGGAACTACAGACATCAGGCCGATATTTGTCATGCCTATCAAATACTGAGGAAAGGTGGCCTGAAAGAAGAAAATATCATTGTTTTTATGTATGATGACATTGCATTCAATTGGGACAATCCAAGGCCTGGAGTCATCATTAACAAACCAGATGGGGGTGATGTTTATGAAGGAGTTCCAAAGGATTACACTGGCGAAGATGCTACTGCTCATAACTTTTATGCTGCTTTACTTGGAGATAAGTCGGCGCTTACCGGTGGCAGTGGGAAGGTTGTGAACAGTGGGCCCGATGATCGCATATTTATATTCTACTCTGATCATGGTGGTCCAGGGGTTCTCGGGACGCCTGCTGGTCCTTACATATATGCATCTGATTTGGTTGAAGTATTGAAGAAAAAGCATGCTTCTGGAACGTATAAAAACCTAGTATTTTATTTGGAGGCATGTGAAGCTGGAAGTATTTTTGAAGGTCTTCTTCCTGAAGATATCAATATTTATGCAACAACGGCTTCGAATGCCGAAGAAAGTAGTTGGGGAACATATTGTCCTGGGGAGTATCCTAGTCCTCCCCCAGAATATTCAACCTGCTTGGGTGACCTGTACAGTGTTGCTTGGATGGAAGACAGTGGAGTTGTTAATGCGTGTGACTATCGTACTGTTAAGGATAGGACTCTAGCTGGAGGTTACTATGGCTCTCACGTGATGCAGTATGGTGATGTAGGGTTTAACAAGGATAATCTCTTCCTGTATTTGGGTACAGATCCTGCAAATGATAATTTGACTTTCGTGGATGAAAACTCCTTATGGTCATCTTCAACAGCAGTCAACCAAAGGGATGCTGATCTCGTCCATTTTTGGCATAAGTTCCGCAAAGCTCCGGAAGGTTCTCCTAAAAAAAATGAAGCTCGGAAACAAGTTCTGGAAGTAATGTCTCACAGAATGCATATAGACGACAGTGTGAAACTTGTTGGAAAGCTTTTATTTGGATTTGAAAAGGCTCCTGAAGTACTGAATGCTGTTAGACCGGCTGGATCGGCACTTGTTGATGACTGGGCCTGCCTGAAAACCATGGTAAGGACTTTTGAGACACATTGTGGATCCTTGTCTCAGTATGGGATGAAACACATGAGGTCCTTTGCAAACATCTGCAATGTAGGAATAAAGAAGGAGCAAATGGCTGAAGCCTCAGCACAAGCTTGTGTCACTATTCCTGCCAGTTCCTGGAGTTCTCTGCAAAGGGGTTTCAGTGCATAA 1431 0.4549 MATATSLSTLFLLFLATVALVAARRDLVGDFLRLPSDSGNDDNVQGTRWAILFAGSNGYWNYRHQADICHAYQILRKGGLKEENIIVFMYDDIAFNWDNPRPGVIINKPDGGDVYEGVPKDYTGEDATAHNFYAALLGDKSALTGGSGKVVNSGPDDRIFIFYSDHGGPGVLGTPAGPYIYASDLVEVLKKKHASGTYKNLVFYLEACEAGSIFEGLLPEDINIYATTASNAEESSWGTYCPGEYPSPPPEYSTCLGDLYSVAWMEDSGVVNACDYRTVKDRTLAGGYYGSHVMQYGDVGFNKDNLFLYLGTDPANDNLTFVDENSLWSSSTAVNQRDADLVHFWHKFRKAPEGSPKKNEARKQVLEVMSHRMHIDDSVKLVGKLLFGFEKAPEVLNAVRPAGSALVDDWACLKTMVRTFETHCGSLSQYGMKHMRSFANICNVGIKKEQMAEASAQACVTIPASSWSSLQRGFSA 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00610 476 PIRSF AE 2 476 IPR043577 GO:0004197|GO:0051603
Vian7g00610 476 Gene3D - 46 335 - -
Vian7g00610 476 PIRSF Legumain 3 476 IPR001096 GO:0006508|GO:0008233
Vian7g00610 476 PRINTS Hemoglobinase (C13) cysteine protease signature 49 73 IPR001096 GO:0006508|GO:0008233
Vian7g00610 476 PRINTS Hemoglobinase (C13) cysteine protease signature 198 214 IPR001096 GO:0006508|GO:0008233
Vian7g00610 476 PRINTS Hemoglobinase (C13) cysteine protease signature 149 168 IPR001096 GO:0006508|GO:0008233
Vian7g00610 476 PRINTS Hemoglobinase (C13) cysteine protease signature 74 103 IPR001096 GO:0006508|GO:0008233
Vian7g00610 476 PRINTS Hemoglobinase (C13) cysteine protease signature 121 136 IPR001096 GO:0006508|GO:0008233
Vian7g00610 476 FunFam Vacuolar-processing enzyme beta-isozyme 336 464 - -
Vian7g00610 476 Pfam Peptidase C13 family 48 311 IPR001096 GO:0006508|GO:0008233
Vian7g00610 476 PANTHER HEMOGLOBINASE FAMILY MEMBER 14 460 IPR001096 GO:0006508|GO:0008233
Vian7g00610 476 CDD legumain_C 338 459 - -
Vian7g00610 476 Gene3D - 336 464 IPR046427 -
Vian7g00610 476 FunFam Vacuolar-processing enzyme beta-isozyme 46 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00610 Vian-Chr7 13991849 13997510 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00610 K01369 - gmx:547700 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00610 7 13991849 13997510 Vian7g00610 7 13991849 13997510 ECH