Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02161 ATGTTTTACCAAGTGTCGAAATCGTCGAATGCTATCTGTGTTGCAATGAAGGAGGACCCGGAGAACGATAAAGACAAAGACGCGAGGATTTGGGGAGCTTTACTCTTCGGCTTAATTGGCGCCACCTTCACTACCTTTGCGGTCGGTCCGCTGCGGAGGAGTGTTGATTGGTGCTATGTTCAGCTAACGAGGACACAGTCACATAAAGGACACAGAAGTGGGTCGTTCCGAACATCATTTCAAGAAGAGGCTTGGAGGAGGCACAATAAGCGACTGCAAGAGGAGTACGAGGAGGAGATGGAAAGAGTGGAGCGAATAAGGCGTATGCAAAGCGTGTTTAACAGAGAAAGGAACAAGTATAAAAGAAGCTACGAGAGCTGGAGGGAAAACGGTCATGGTGCATATCATCAGCATTACCAGAGAGATGATTGGTACTGGAAGACTGATACATCCTTTAGAGATCGGAGGACCAATTATCGAGAAACTCCAAGAGAGACTGGAAACTATGCATTATCACATCACTACTCAATTTTGGGTCTTGACAGGTTTAGAAAAGCACCATATTCAGATGCTGAGATTAAGACAGCATTTAGAACTAAGGCAAAGGAGTATCATCCTGATCAAAACCAGGATAATATTCAGGCTGCTGAGGCGAAGTTCAAGGAAGCCATTAATTCACTTCATCAACTTAAAAAGTGGATCCATGAGGCACTTTAA 717 0.4449 MFYQVSKSSNAICVAMKEDPENDKDKDARIWGALLFGLIGATFTTFAVGPLRRSVDWCYVQLTRTQSHKGHRSGSFRTSFQEEAWRRHNKRLQEEYEEEMERVERIRRMQSVFNRERNKYKRSYESWRENGHGAYHQHYQRDDWYWKTDTSFRDRRTNYRETPRETGNYALSHHYSILGLDRFRKAPYSDAEIKTAFRTKAKEYHPDQNQDNIQAAEAKFKEAINSLHQLKKWIHEAL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02161 238 Gene3D DnaJ domain 167 233 IPR036869 -
Vian4g02161 238 SUPERFAMILY Chaperone J-domain 172 230 IPR036869 -
Vian4g02161 238 SMART dnaj_3 172 235 IPR001623 -
Vian4g02161 238 Coils Coil 82 109 - -
Vian4g02161 238 CDD DnaJ 174 222 IPR001623 -
Vian4g02161 238 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 17 232 - -
Vian4g02161 238 Pfam DnaJ domain 174 223 IPR001623 -
Vian4g02161 238 ProSiteProfiles dnaJ domain profile. 173 238 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02161 Vian-Chr4 38463796 38469442 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02161 - - gmx:100812371 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02161 4 38463796 38469442 Vian4g02161 4 38463796 38469442 ECH
Vian7g00631 7 14304665 14308378 Vian4g02161 4 38463796 38469442 PCT