Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01613 ATGAAGTACGTTTTGGTGACGGGTGGAGTTGTTAGTGGACTTGGGAAAGGAGTTACTGCCAGCAGCATTGGAGTACTCCTTCAGGCTTGTGGCTTTCGAGTTACTTCGATCAAAATTGATCCCTACCTGAACACTGATGCAGGGACAATGTCTCCTTTTGAGCATGGTGAAGTGTTTGTCTTAGATGATGGTGGTGAGGTTGACCTTGATCTTGGAAACTACGAACGTTTCTTGCACATCAAATTAACTCGcgaaaataatattacaacCGGAAAAATTTATCAGTCTGttattgagaaagaaagaagaggagATTATCTTGGCAAAACTGTTCAGGTTGTTCCACATGTTACAGATGCTATCCAAGAGTGGATAGAACGTGTAGCACAGGTACCTGTTGATGGAAAAGAAGGCCCTGCTGATGTTTGTGTCATTGAATTGGGTGGAACTATAGGGGATATTGAATCTATGCCTTTTATTGAAGCACTTGGCCAATTTTCGTACCGTGTAGgccCTAGCAACTTCTGTTTGGTTCATGTCAGCCTGGTGCCTGTTCTCAATGTTGTCGGTGAACAGAAAACAAAACCAACCCAGCACAGTGTCCGTCAACTAAGAGGGTTAGGGTTGGTCCCAAATCTTCTTGCTTGTCGCAGTTCAAAGGaacttgatgaaaatgttaAGGCAAAACTTTCTCAATTTTGTCACGTGCCGTTATCAAACATACTCACTCTCTGTGATGTTCCAAATATTTGGCACATTCCTTTGCTGTTACGAGACCAGAAGGCACACGAAGCAATCCTGAAAACGTTAAACTTGCAACGTGTTGCTAAAGAGCCCGATTTTAAGGAGTGGATCACTAGAACAAAAGTTTATGACAAATTTCCTGAATCTGTTAGAATTGCAATGGTGGGAAAATATACAGGCCTTTCAGATGCATATCTTTCTGTACTGAAGGCACTTCTGCACGCTTCTGTTGCTTGCAACCGCAAGTTGATTGTGGACTGGGTTCCTGCTGGGGATCTGGAGGACGATACCTTTAAAGAGGATCCCAATGCATATAAAGCTGCTTGGAGTCTTTTAGAGgGTGCTAATGGGATTCTAGTTCCGGGAGGTTTTGGTGATAGAGGAGTTCAAGGGAAAACACTTGCTGCTAAGTATGCTCGTGAACATAGTGTTCCGTTTCTTGGCATTTGTTTGGGGATGCAAATTGCTGTTGTTGAATTTGCAAGATCTGTTCTAGGTCTTCATGATGCCAATAGCACAGAATTTCATCCTGAAACCAAAAATCCTTGTGTCATATTTATGCCAGAAGGTTCGAAGACTCACATGGGAGGCACTATGCGTCTTGGTTCAAGGAGAACTTACTTCCATGTTGCTGACTGCAAATCAGCCAAATTGTATGGCAATGCAAGTTTTATAGATGAGCGGCATCGCCATAGATACGAGGTTAATCCTGACATGATATCACAACTTGAGACTGCTGGTCTATCTTTTGTCGGCAAAGATGAAACTGGGAGGCGAATGGAGATAGTTGAAATGCCTGGTCATCCTTTCTTTATTGGTGCTCAGTTTCACCCTGAGTTTAAGTCCAGACCAGGGAAACCTTCTCCACTATTCTCAGGATTAATAGAAGCAGCATGTGAGAGGACAGTTGTGTCAAAAAGCGAAGAAAATGCAAACTTAACCAATGGGATACATGAACCACACTCGCCAACATCGAAAGCACAAAATGGAAATGGGTTGAAATCTTCCAATGGTTCCTTAAATGTTGTATGTCCCAATGGTTCCTTAAATATGGAGGAGGGAATTTAG 1812 0.4145 MKYVLVTGGVVSGLGKGVTASSIGVLLQACGFRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLHIKLTRENNITTGKIYQSVIEKERRGDYLGKTVQVVPHVTDAIQEWIERVAQVPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGPSNFCLVHVSLVPVLNVVGEQKTKPTQHSVRQLRGLGLVPNLLACRSSKELDENVKAKLSQFCHVPLSNILTLCDVPNIWHIPLLLRDQKAHEAILKTLNLQRVAKEPDFKEWITRTKVYDKFPESVRIAMVGKYTGLSDAYLSVLKALLHASVACNRKLIVDWVPAGDLEDDTFKEDPNAYKAAWSLLEGANGILVPGGFGDRGVQGKTLAAKYAREHSVPFLGICLGMQIAVVEFARSVLGLHDANSTEFHPETKNPCVIFMPEGSKTHMGGTMRLGSRRTYFHVADCKSAKLYGNASFIDERHRHRYEVNPDMISQLETAGLSFVGKDETGRRMEIVEMPGHPFFIGAQFHPEFKSRPGKPSPLFSGLIEAACERTVVSKSEENANLTNGIHEPHSPTSKAQNGNGLKSSNGSLNVVCPNGSLNMEEGI 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01613 603 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Tsu08g01613 603 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 552 - -
Tsu08g01613 603 MobiDBLite consensus disorder prediction 561 593 - -
Tsu08g01613 603 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Tsu08g01613 603 PANTHER CTP SYNTHASE 1 570 IPR004468 GO:0003883|GO:0006221
Tsu08g01613 603 PANTHER CTP SYNTHASE 1 570 - -
Tsu08g01613 603 Gene3D - 295 558 IPR029062 -
Tsu08g01613 603 SUPERFAMILY Class I glutamine amidotransferase-like 297 549 IPR029062 -
Tsu08g01613 603 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Tsu08g01613 603 Hamap CTP synthase [pyrG]. 1 550 IPR004468 GO:0003883|GO:0006221
Tsu08g01613 603 Pfam Glutamine amidotransferase class-I 309 545 IPR017926 -
Tsu08g01613 603 Gene3D - 1 292 IPR027417 -
Tsu08g01613 603 CDD GATase1_CTP_Synthase 298 543 IPR033828 GO:0003883|GO:0006241
Tsu08g01613 603 TIGRFAM PyrG: CTP synthase 1 545 IPR004468 GO:0003883|GO:0006221
Tsu08g01613 603 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01613 Tsu-Chr8 19154751 19161673 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01613 08 19154751 19161673 Tsu08g01613 08 19154751 19161673 ECH
Tsu03g00544 03 4595824 4603680 Tsu08g01613 08 19154751 19161673 PCT