Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01324 ATGGGgaagatagaaaaaaaatacaaatcaaaaattaaattttcattacCAAAAGATCATAATAATTTTCTATCATCCTTGTCATCAATATCATCTTTGATGGCTATCCTCCTGGTTCTGGTTCTTCTTTTCGCCTTTTCTTCGCCTTCATACGCTCTTCCTTCGTCTCCAAGTTTCGTTCCTAAGGACAATTTTCTCATTGATTGTGGTGCTGAAAATGCACCTGCTTTACCTGATGGTAGACAATTCAAATCAGATCCACAAGCAAGTTCATTCTTACAAGCTAATGATGATTTCAAAGTTTCATCGCCTGATGTTAATGTTCCTTCACCTATATATTCAAATTCTAGAATCTTCATTCAAGAAGCTAAGTATTCATTCCATTTGGTTGAACCTGGTTTTCATTGGATTCGTCTTCATTTTTATCCGATCAAAAACAATGTTTTCGATCTTCAAAAGGCGACGTTTTCTGTAAACACGGATACTTTTGTTCTTCTTCATAGCTTCAATGTTAATAACACTGATAAAGCAATCCTTAAAGAGTATCTTATCAATGTAACACAACCACAGTTTACATTATCTTTCATTCCTTTGAAGAATTCGGCTGCATTTATCAATGCGATCGAGGTTGTTTCGGCTCCTGAAAACCTAATCTTCGATACTGGCTCAGGACTTTTCCCGGTTGCCGAGGTTAATGGATTAACAACCTATGCTTTCCAGCCTGTTTATAGATTGAACAATGGTGGACCTCTTATCACATCATCAAATGATACACTTGGAAGAACTTGGGAATCTGATGAACCTTACCTTACAAATAAAAATGCTGCAAAAAGTGTTTCTGTTGCTACTAATGTTATTAAGTTTCCTGAAAACATGCCGACAATTTCGCCTTTGATTGCGCCACAAACTGTTTATGCTTCTGCAAGTGAAATGGGTGAGACTGGTATTAATCTACCAAATTTCAATGTATCTTGGAAATTTGATGTTGACACTTCTTTTAGTTACCTTATTAGGTTGCATTTTTGTGACATTGTGAGTAAAGGACTTAATCAACTTTACTTCAATGTTTATATTAATAGCAAAGTTGCAATTCCCAATTTGGATTTATCAGCTATAACTGGTGCATTGGCAGCACCATATTACAAAGATTTTGTTGTCAATGCAACATTGATGACTCAAGGACTAACTATTCAAGTTGGTCCTGGTGCTACAAATGCTGATAGTGGAAATGCTAATGCAATTTTGAATGGTATTGAAGTTATGAAGATAAGCAACACAGTGAATAGTTTGGATGGTGAGTTTGGTGTTGATGGAAGAAGAATCGGCGGTTCGAACCGAGGAACGGTTGCAGCGGTCGGTTTCGCTATGATGTTTGGAGCATTTGTTGGTCTAGGTGCTATGGTGATCAAGTGGCATAAGAGGCCTCAAGATTGGCAAAAGAGGAATAGTTTCTCTTCATGGTTGCTTCCTTTACACGCCGGTGACACGAGTTTCATGAGTAGTAAGACTTCAATGGGGAAAAGCAACATTTTCTCATCATCAATGGGATTAGGAAGGATTTTCTCCTTTGCTGAAATACAAGAAGCAACAAAGAATTTTGACTCCAAAAACATCATTGGTGTTGGTGGATTTGGTAATGTTTATTTAGGTGTGATTGATGAAGGGACTGAAGTTGCTGTcaagagaggaaatccacaatcAGAACAAGGAATCAATGAATTCCAAACTGAAATTCAAATGTTGTCTAAGCTTAGACATAGACATTTGGTTTCTATGATTGGATATTGTGATGAAAATGATGAAATGATTCTTGTTTATGAGTACATGCCTAATGGTCATTTGAGGGATCATCTTTATGGAAAGAACAACCCTTCACTTTCTTGGAAACAAAGGTTAGAGATTTGCATTGGATCGGCAAGAGGTCTTCATTACCTTCACACTGGCACGGCGCAAGGTATCATTCATCGCGATGTTAAGTCAACAAACATTTTACTTGATGAGAATTTCACAGCTAAGGTATCCGATTTTGGACTTTCGAAAGATGCGCCTATGGGACAAGGTCATGTTAGTACTGCGGTGAAAGGTAGTTTCGGTTATCTTGACCCCGAATACTTCAGAAGACAACAATTGACCGAAAAGTCTGATGTTTACTCGTTCGGAGTGGTCCTTCTTGAGGCATTGTGCGCTAGGCCGGCTATTAACCCTCAGTTACCTAGAGAACAAGTTAACTTAGCAGATTGGGCTATGCAATGGAAGAGAAAGGGTTTACTTGATAAAATCATTGACCCTCAACTCGTCGGTTCGATTAATCCTGAATCAATGAAGAAGTTCGCCGAGGCTGCTGAGAAATGTTTAGCTGATCATGGTGTTGATAGGCCTTCGATGGGAGATGTTCTTTGGAATTTGGAGTATGCATTGCAGCTTCAAGAAGCTTTCACACAAGGAAAAGCTGAAGATGAGACTGAGATTCAAGCTTCTGCTTCTGCttctgctgctgctgctgctgctgcagcTGTTcctacttcacctgctcctaCTGCACCTGCTCCTACTGCACCTCCCACTACTACTGTTGACACCCCCCCAGTTGATCATCAAGaagttaataacaataataataatactaataataataataatgctgAAGTTCAAGCTATTGATGACCATTCTGGAACTGCAATGTTTGCACAGTTTAGTAATCTTAATGGAAGGTAA 2715 0.3672 MGKIEKKYKSKIKFSLPKDHNNFLSSLSSISSLMAILLVLVLLFAFSSPSYALPSSPSFVPKDNFLIDCGAENAPALPDGRQFKSDPQASSFLQANDDFKVSSPDVNVPSPIYSNSRIFIQEAKYSFHLVEPGFHWIRLHFYPIKNNVFDLQKATFSVNTDTFVLLHSFNVNNTDKAILKEYLINVTQPQFTLSFIPLKNSAAFINAIEVVSAPENLIFDTGSGLFPVAEVNGLTTYAFQPVYRLNNGGPLITSSNDTLGRTWESDEPYLTNKNAAKSVSVATNVIKFPENMPTISPLIAPQTVYASASEMGETGINLPNFNVSWKFDVDTSFSYLIRLHFCDIVSKGLNQLYFNVYINSKVAIPNLDLSAITGALAAPYYKDFVVNATLMTQGLTIQVGPGATNADSGNANAILNGIEVMKISNTVNSLDGEFGVDGRRIGGSNRGTVAAVGFAMMFGAFVGLGAMVIKWHKRPQDWQKRNSFSSWLLPLHAGDTSFMSSKTSMGKSNIFSSSMGLGRIFSFAEIQEATKNFDSKNIIGVGGFGNVYLGVIDEGTEVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSMIGYCDENDEMILVYEYMPNGHLRDHLYGKNNPSLSWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDENFTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPQLPREQVNLADWAMQWKRKGLLDKIIDPQLVGSINPESMKKFAEAAEKCLADHGVDRPSMGDVLWNLEYALQLQEAFTQGKAEDETEIQASASASAAAAAAAAVPTSPAPTAPAPTAPPTTTVDTPPVDHQEVNNNNNNTNNNNNAEVQAIDDHSGTAMFAQFSNLNGR 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01324 904 MobiDBLite consensus disorder prediction 838 881 - -
Tsu08g01324 904 MobiDBLite consensus disorder prediction 843 857 - -
Tsu08g01324 904 Gene3D Transferase(Phosphotransferase) domain 1 609 832 - -
Tsu08g01324 904 ProSitePatterns Protein kinases ATP-binding region signature. 539 561 IPR017441 GO:0005524
Tsu08g01324 904 ProSiteProfiles Protein kinase domain profile. 533 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01324 904 Gene3D Phosphorylase Kinase; domain 1 495 608 - -
Tsu08g01324 904 CDD STKc_IRAK 539 803 - -
Tsu08g01324 904 Pfam Malectin-like domain 67 423 IPR024788 -
Tsu08g01324 904 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Tsu08g01324 904 MobiDBLite consensus disorder prediction 858 881 - -
Tsu08g01324 904 Gene3D - 64 214 - -
Tsu08g01324 904 Gene3D - 239 425 - -
Tsu08g01324 904 PANTHER BNAC03G60370D PROTEIN 49 869 - -
Tsu08g01324 904 SMART serkin_6 533 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01324 904 SUPERFAMILY Protein kinase-like (PK-like) 508 803 IPR011009 -
Tsu08g01324 904 Pfam Protein tyrosine and serine/threonine kinase 536 797 IPR001245 GO:0004672|GO:0006468
Tsu08g01324 904 PANTHER OS07G0166700 PROTEIN 49 869 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01324 Tsu-Chr8 15088577 15091300 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu08g01324 Malectin_like 7.6e-36 CL0202