Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu08g01324 | ATGGGgaagatagaaaaaaaatacaaatcaaaaattaaattttcattacCAAAAGATCATAATAATTTTCTATCATCCTTGTCATCAATATCATCTTTGATGGCTATCCTCCTGGTTCTGGTTCTTCTTTTCGCCTTTTCTTCGCCTTCATACGCTCTTCCTTCGTCTCCAAGTTTCGTTCCTAAGGACAATTTTCTCATTGATTGTGGTGCTGAAAATGCACCTGCTTTACCTGATGGTAGACAATTCAAATCAGATCCACAAGCAAGTTCATTCTTACAAGCTAATGATGATTTCAAAGTTTCATCGCCTGATGTTAATGTTCCTTCACCTATATATTCAAATTCTAGAATCTTCATTCAAGAAGCTAAGTATTCATTCCATTTGGTTGAACCTGGTTTTCATTGGATTCGTCTTCATTTTTATCCGATCAAAAACAATGTTTTCGATCTTCAAAAGGCGACGTTTTCTGTAAACACGGATACTTTTGTTCTTCTTCATAGCTTCAATGTTAATAACACTGATAAAGCAATCCTTAAAGAGTATCTTATCAATGTAACACAACCACAGTTTACATTATCTTTCATTCCTTTGAAGAATTCGGCTGCATTTATCAATGCGATCGAGGTTGTTTCGGCTCCTGAAAACCTAATCTTCGATACTGGCTCAGGACTTTTCCCGGTTGCCGAGGTTAATGGATTAACAACCTATGCTTTCCAGCCTGTTTATAGATTGAACAATGGTGGACCTCTTATCACATCATCAAATGATACACTTGGAAGAACTTGGGAATCTGATGAACCTTACCTTACAAATAAAAATGCTGCAAAAAGTGTTTCTGTTGCTACTAATGTTATTAAGTTTCCTGAAAACATGCCGACAATTTCGCCTTTGATTGCGCCACAAACTGTTTATGCTTCTGCAAGTGAAATGGGTGAGACTGGTATTAATCTACCAAATTTCAATGTATCTTGGAAATTTGATGTTGACACTTCTTTTAGTTACCTTATTAGGTTGCATTTTTGTGACATTGTGAGTAAAGGACTTAATCAACTTTACTTCAATGTTTATATTAATAGCAAAGTTGCAATTCCCAATTTGGATTTATCAGCTATAACTGGTGCATTGGCAGCACCATATTACAAAGATTTTGTTGTCAATGCAACATTGATGACTCAAGGACTAACTATTCAAGTTGGTCCTGGTGCTACAAATGCTGATAGTGGAAATGCTAATGCAATTTTGAATGGTATTGAAGTTATGAAGATAAGCAACACAGTGAATAGTTTGGATGGTGAGTTTGGTGTTGATGGAAGAAGAATCGGCGGTTCGAACCGAGGAACGGTTGCAGCGGTCGGTTTCGCTATGATGTTTGGAGCATTTGTTGGTCTAGGTGCTATGGTGATCAAGTGGCATAAGAGGCCTCAAGATTGGCAAAAGAGGAATAGTTTCTCTTCATGGTTGCTTCCTTTACACGCCGGTGACACGAGTTTCATGAGTAGTAAGACTTCAATGGGGAAAAGCAACATTTTCTCATCATCAATGGGATTAGGAAGGATTTTCTCCTTTGCTGAAATACAAGAAGCAACAAAGAATTTTGACTCCAAAAACATCATTGGTGTTGGTGGATTTGGTAATGTTTATTTAGGTGTGATTGATGAAGGGACTGAAGTTGCTGTcaagagaggaaatccacaatcAGAACAAGGAATCAATGAATTCCAAACTGAAATTCAAATGTTGTCTAAGCTTAGACATAGACATTTGGTTTCTATGATTGGATATTGTGATGAAAATGATGAAATGATTCTTGTTTATGAGTACATGCCTAATGGTCATTTGAGGGATCATCTTTATGGAAAGAACAACCCTTCACTTTCTTGGAAACAAAGGTTAGAGATTTGCATTGGATCGGCAAGAGGTCTTCATTACCTTCACACTGGCACGGCGCAAGGTATCATTCATCGCGATGTTAAGTCAACAAACATTTTACTTGATGAGAATTTCACAGCTAAGGTATCCGATTTTGGACTTTCGAAAGATGCGCCTATGGGACAAGGTCATGTTAGTACTGCGGTGAAAGGTAGTTTCGGTTATCTTGACCCCGAATACTTCAGAAGACAACAATTGACCGAAAAGTCTGATGTTTACTCGTTCGGAGTGGTCCTTCTTGAGGCATTGTGCGCTAGGCCGGCTATTAACCCTCAGTTACCTAGAGAACAAGTTAACTTAGCAGATTGGGCTATGCAATGGAAGAGAAAGGGTTTACTTGATAAAATCATTGACCCTCAACTCGTCGGTTCGATTAATCCTGAATCAATGAAGAAGTTCGCCGAGGCTGCTGAGAAATGTTTAGCTGATCATGGTGTTGATAGGCCTTCGATGGGAGATGTTCTTTGGAATTTGGAGTATGCATTGCAGCTTCAAGAAGCTTTCACACAAGGAAAAGCTGAAGATGAGACTGAGATTCAAGCTTCTGCTTCTGCttctgctgctgctgctgctgctgcagcTGTTcctacttcacctgctcctaCTGCACCTGCTCCTACTGCACCTCCCACTACTACTGTTGACACCCCCCCAGTTGATCATCAAGaagttaataacaataataataatactaataataataataatgctgAAGTTCAAGCTATTGATGACCATTCTGGAACTGCAATGTTTGCACAGTTTAGTAATCTTAATGGAAGGTAA | 2715 | 0.3672 | MGKIEKKYKSKIKFSLPKDHNNFLSSLSSISSLMAILLVLVLLFAFSSPSYALPSSPSFVPKDNFLIDCGAENAPALPDGRQFKSDPQASSFLQANDDFKVSSPDVNVPSPIYSNSRIFIQEAKYSFHLVEPGFHWIRLHFYPIKNNVFDLQKATFSVNTDTFVLLHSFNVNNTDKAILKEYLINVTQPQFTLSFIPLKNSAAFINAIEVVSAPENLIFDTGSGLFPVAEVNGLTTYAFQPVYRLNNGGPLITSSNDTLGRTWESDEPYLTNKNAAKSVSVATNVIKFPENMPTISPLIAPQTVYASASEMGETGINLPNFNVSWKFDVDTSFSYLIRLHFCDIVSKGLNQLYFNVYINSKVAIPNLDLSAITGALAAPYYKDFVVNATLMTQGLTIQVGPGATNADSGNANAILNGIEVMKISNTVNSLDGEFGVDGRRIGGSNRGTVAAVGFAMMFGAFVGLGAMVIKWHKRPQDWQKRNSFSSWLLPLHAGDTSFMSSKTSMGKSNIFSSSMGLGRIFSFAEIQEATKNFDSKNIIGVGGFGNVYLGVIDEGTEVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSMIGYCDENDEMILVYEYMPNGHLRDHLYGKNNPSLSWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDENFTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPQLPREQVNLADWAMQWKRKGLLDKIIDPQLVGSINPESMKKFAEAAEKCLADHGVDRPSMGDVLWNLEYALQLQEAFTQGKAEDETEIQASASASAAAAAAAAVPTSPAPTAPAPTAPPTTTVDTPPVDHQEVNNNNNNTNNNNNAEVQAIDDHSGTAMFAQFSNLNGR | 904 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu08g01324 | 904 | MobiDBLite | consensus disorder prediction | 838 | 881 | - | - | |
Tsu08g01324 | 904 | MobiDBLite | consensus disorder prediction | 843 | 857 | - | - | |
Tsu08g01324 | 904 | Gene3D | Transferase(Phosphotransferase) domain 1 | 609 | 832 | - | - | |
Tsu08g01324 | 904 | ProSitePatterns | Protein kinases ATP-binding region signature. | 539 | 561 | IPR017441 | GO:0005524 | |
Tsu08g01324 | 904 | ProSiteProfiles | Protein kinase domain profile. | 533 | 805 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu08g01324 | 904 | Gene3D | Phosphorylase Kinase; domain 1 | 495 | 608 | - | - | |
Tsu08g01324 | 904 | CDD | STKc_IRAK | 539 | 803 | - | - | |
Tsu08g01324 | 904 | Pfam | Malectin-like domain | 67 | 423 | IPR024788 | - | |
Tsu08g01324 | 904 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 653 | 665 | IPR008271 | GO:0004672|GO:0006468 | |
Tsu08g01324 | 904 | MobiDBLite | consensus disorder prediction | 858 | 881 | - | - | |
Tsu08g01324 | 904 | Gene3D | - | 64 | 214 | - | - | |
Tsu08g01324 | 904 | Gene3D | - | 239 | 425 | - | - | |
Tsu08g01324 | 904 | PANTHER | BNAC03G60370D PROTEIN | 49 | 869 | - | - | |
Tsu08g01324 | 904 | SMART | serkin_6 | 533 | 805 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu08g01324 | 904 | SUPERFAMILY | Protein kinase-like (PK-like) | 508 | 803 | IPR011009 | - | |
Tsu08g01324 | 904 | Pfam | Protein tyrosine and serine/threonine kinase | 536 | 797 | IPR001245 | GO:0004672|GO:0006468 | |
Tsu08g01324 | 904 | PANTHER | OS07G0166700 PROTEIN | 49 | 869 | IPR045272 | GO:0004714|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu08g01324 | Tsu-Chr8 | 15088577 | 15091300 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu08g01324 | 59 | 904 | Receptor kinase-like Gene Family | AT4G39110 | 66.901 | 0.0 | 1170 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CrRLK1L-1 | Tsu08g01324 | Malectin_like | 7.6e-36 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu08g01324 | - | - | gmx:100790759 | 1433.7 |