Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00845 ATGGTGGACTCTTACGCGCTCGGATTCATAATTACCTCCGTCATCACCATCTTTTCACTCTACAATTTCCTTTTCTCTCGTAAGAATCGTTCTGAAGCAACCACTTCAACCACTACCGAGAATATTACAACCGCCACCGGTGAATGTAGATCTTTTAATCCTAACGGCGACGTTGATATCATCATTGTTGGTGCCGGTGTTGCTGGCTCCGCTCTCGCTTACACTCTCGGCAAgGATGGACGTCGAGTACTTGTTATTGAACGTGATTTGAATGAACCGGACCGAATTGTTGGAGAGTTGCTACAACCTGGAGGCTATCTCAAGTTGATTGAGCTTGGTCTTGAAGATTGTGTGGAGAAAATTGATGCTCAGCAAGTGTTCGGGTATGCTCTTTTCAAGGACGGGAAACACACACGACTCTCTTATCCCTTGGAAAAGTTTCACTCAGATATCGCCGGCAGAAGCTTTCACAATGGGCGTTTTATTCAGAGGATGAGAGAGAAGGCTTCCTCCCTTCCCAATGTACGATTGGAGCAAGGAACAGTCACTTCCCTGCTTGAAGAGCAAGGTATAATTAAAGGTGTACAGTACAAAACGAAAGATGCTCAGGAATTATCGGCATGTGCACCTCTTACCATTGTTTGTGATGGCTGTTTCTCCAACTTGCGCCGTTCTCTTTGTAATCCTAAGGTAGAGGTTCCGTCTTGTTTTGTTGGCTTAGTTTTGGAAAATTGTGAACTTCCATGTGCAAATCATGGTCACGTCATTCTAGGAGATCCTTCACCGGTTCTGTTCTATCCCATAAGTAGTACAGAAGTTCGCTGTCTGGTTGATGTTCCTGGTCAGAAGGTTCCATCTATCTCTAATGGTGAAATGGCAATGTATTTGAAGACAGTGGTAGCTCCACAGGTTCCCCCTGAGATTCATGATGCTTTCATAGCTGCCGTGGACAAAGGTAACATAAGGACAATGCCTAACAGAAGCATGCCAGCCGCTCCTTATCCTACTCCAGGAGCCCTTTTGATGGGAGATGCATTCAACATGCGCCATCCCCTAACTGGTGGCGGGATGACTGTGGCATTATCTGATATAGTAGTGCTGCGAAATCTCCTCAAGCCTTTGCGAGACCTGAATGATGCACCTAGCCTTTGCAAATACCTTGAATCCTTCTATACCTTGCGTAAGCCAGTAGCATCCACCATAAATACGTTGGCAGGAGCACTTTACAAGGTTTTTTGCTCATCACCTGATCCAGCAAGGAAAGAAATGCGCCAAGCTTGCTTTGATTATCTGAGTCTTGGGGGTTTATTCTCAGAAGGACCAGTCTCTTTGCTTTCAGGATTAAATCCACGCCCCCTGAGTTTGGTTCTTCATTTCTTCGCCGTCGCGATATATGGTGTTGGACGTTTATTGTTACCATTTCCTTCCCCTAAACGCATATGGATTGGAGTCCGATTAATTGCTAGTGCATCAGGAATCATCTTGCCCATAATTAAGGCAGAAGGAGTTCGTCAAATGTTCTTCCCTGCAACTGTTCCAGCTTATTACAGAACTCCTCCAGCTGCATAA 1569 0.4525 MVDSYALGFIITSVITIFSLYNFLFSRKNRSEATTSTTTENITTATGECRSFNPNGDVDIIIVGAGVAGSALAYTLGKDGRRVLVIERDLNEPDRIVGELLQPGGYLKLIELGLEDCVEKIDAQQVFGYALFKDGKHTRLSYPLEKFHSDIAGRSFHNGRFIQRMREKASSLPNVRLEQGTVTSLLEEQGIIKGVQYKTKDAQELSACAPLTIVCDGCFSNLRRSLCNPKVEVPSCFVGLVLENCELPCANHGHVILGDPSPVLFYPISSTEVRCLVDVPGQKVPSISNGEMAMYLKTVVAPQVPPEIHDAFIAAVDKGNIRTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRDLNDAPSLCKYLESFYTLRKPVASTINTLAGALYKVFCSSPDPARKEMRQACFDYLSLGGLFSEGPVSLLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRIWIGVRLIASASGIILPIIKAEGVRQMFFPATVPAYYRTPPAA 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00845 522 Pfam Squalene epoxidase 209 481 IPR013698 GO:0004506|GO:0016021|GO:0050660
Tsu07g00845 522 SUPERFAMILY FAD/NAD(P)-binding domain 57 433 IPR036188 -
Tsu07g00845 522 Gene3D - 51 429 IPR036188 -
Tsu07g00845 522 PANTHER SQUALENE MONOOXYGENASE 1 521 IPR040125 GO:0004506|GO:0016126
Tsu07g00845 522 PANTHER SQUALENE MONOOXYGENASE-RELATED 1 521 - -
Tsu07g00845 522 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 208 223 - -
Tsu07g00845 522 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 351 367 - -
Tsu07g00845 522 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 59 81 - -
Tsu07g00845 522 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 336 351 - -
Tsu07g00845 522 Pfam NAD(P)-binding Rossmann-like domain 62 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00845 Tsu-Chr7 6917319 6922446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00845 40 520 Miscellaneous Gene Families AT1G58440 80.124 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00845 K00511 - gmx:100820031 936.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00845 07 6917319 6922446 Tsu07g00845 07 6917319 6922446 ECH
Tsu01g00490 01 4245160 4249860 Tsu07g00845 07 6917319 6922446 PCT