Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01485 ATGAAGTATGTGTTGGTGACTGGTGGTGTTGTGAGTGGACTTGGGAAAGGAGTCACTGCTAGCAGTATTGGACTCCTCCTTCAAGCTTGCGGTCTTCGAGTTACTTCTATCAAGATTGATCCCTACCTGAACACTGATGCAGGGACAATGTCTCCTTTTGAACATGGAGAAGTGTTTGTCCTCGATGATGGTGGTGAGGTTGACCTTGATCTTGGAAACTATGAACGTTTCTTGGACATCAAATTGACTCGCGACAATAATATCACTACTGGAAAAATATATCAGtctGTTATTGAGAAGGAGCGAAGAGGAGATTATCTCGGAAAGACTGTTCAGGTTGTTCCACACATAACAGATGCCATCCAAGATTGGATCGAGCGTGTAGCAAAGATACCAGTTGATGGAAAAGAAGGGCCTGCTGATGTTTGTGTCATCGAATTGGGTGGAACCATAGGGGATATTGAGTCTATGCCTTTTATTGAAGCACTTGGCCAATTTTCATACCGCGTAGGCCCTGGCAACTTTTGTTTGGTTCATGTCAGTCTGGTTCCGATTCTAAACGTTGTTGGCGAACAGAAAACAAAGCCAACTCAGCACAGTGTTCGTCAACTTAGAGGATTAGGTTTATTCCCTAATCTTCTTGCTTGTCGCTGTTCAAAGGAACTTGACGATAATACTAAGGCAAAACTTGCTCAATTTTGTCATGTGCCGTTACCAAACGTACTTACTCTCCATGATGTTCCAAATATTTGGCACATTCCTTTGCTATTGAAAGACCAGAAGGCACACGAGTCGATCCTGAAAGCATTAAACCTGCCAGGTGTTGCTACAGAGCCTAATTTGAAGGAGTGGACCCTTAGGACAAAGATTTATGACAAATGTCATGAAACTGTTAGAATTGCTATGGTGGGAAAGTACACCGGACTTTCAGATGCATATCTTTCTGTTCTGAAGGCACTTTTGCATGCTGCTGTTGCTCACAATCGTAAACTTATTGTCGACTGGGTTCCAGCTGGTGATCTTGAAGATGTTACATACGGAGAGGATCCTACTGCTTATAGAGCTGCATGGAGTCTTTTGAAGGGTGCTAATGGAGTTCTAGTTCCAGGAGGTTTTGGAGATAGAGGAGTGCAAGGGAAAATTCTTGCTGCTAAGTATGCTCGAGAAAATAATGTTCCATATCTCGGCATTTGCTTGGGGATGCAAATTGCTGTTATTGAGTTTGCGCGATCTGTTCTCGGTCTGCATGATGCTACTAGTACAGAATTCGATCCTGAAACCAAGACCCCGTGTGTCATATTTATGCCAGAAGGTTCAAAGACACATATGGGAGGGACTATGCGTCTTGGTTCAAGGACAACTTACTTCGAAGTTGCTGACTGCAAATCTGCAAAATTGTATGGAAATGTAAGCTCTGTTGATGAGCGTCATCGGCATAGATATGAGGTTAATCCTGACATGGTCTCTCAGCTAGAGAGTGCTGGTCTATCTTTTGTTGGCAAAGATGAAACCGGATGTCGCATGGAGATAGTTGAACTGGCTAGCCATCCTTTTTTTATTGGCGTTCAGTTTCACCCTGAGTTCAAGTCGAGACCAGGAAAACCTTCTCCACTCTTCTCAGGATTAATAGAAGCAGCTTGTGAACCAAAGAGGACAGTTACAATGCTGAGCAACGGCCATGCAAAGTTACCTAATGGAATATATAACAACGGACACTCGCCAATCCTGAAACCACACCAAAATGGAAATGGCTTCATATCATCCAAATCCAATGGATCCTTAAAAGGCGTATTTAGCAACAACGGCAATGGAGTGTATGTGGATGGTAGTTGTTAG 1836 0.4319 MKYVLVTGGVVSGLGKGVTASSIGLLLQACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHITDAIQDWIERVAKIPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLVHVSLVPILNVVGEQKTKPTQHSVRQLRGLGLFPNLLACRCSKELDDNTKAKLAQFCHVPLPNVLTLHDVPNIWHIPLLLKDQKAHESILKALNLPGVATEPNLKEWTLRTKIYDKCHETVRIAMVGKYTGLSDAYLSVLKALLHAAVAHNRKLIVDWVPAGDLEDVTYGEDPTAYRAAWSLLKGANGVLVPGGFGDRGVQGKILAAKYARENNVPYLGICLGMQIAVIEFARSVLGLHDATSTEFDPETKTPCVIFMPEGSKTHMGGTMRLGSRTTYFEVADCKSAKLYGNVSSVDERHRHRYEVNPDMVSQLESAGLSFVGKDETGCRMEIVELASHPFFIGVQFHPEFKSRPGKPSPLFSGLIEAACEPKRTVTMLSNGHAKLPNGIYNNGHSPILKPHQNGNGFISSKSNGSLKGVFSNNGNGVYVDGSC 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01485 611 Pfam Glutamine amidotransferase class-I 309 545 IPR017926 -
Tsu06g01485 611 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Tsu06g01485 611 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Tsu06g01485 611 PANTHER CTP SYNTHASE 1 575 IPR004468 GO:0003883|GO:0006221
Tsu06g01485 611 PANTHER CTP SYNTHASE 1 575 - -
Tsu06g01485 611 Hamap CTP synthase [pyrG]. 1 550 IPR004468 GO:0003883|GO:0006221
Tsu06g01485 611 TIGRFAM PyrG: CTP synthase 1 545 IPR004468 GO:0003883|GO:0006221
Tsu06g01485 611 SUPERFAMILY Class I glutamine amidotransferase-like 297 550 IPR029062 -
Tsu06g01485 611 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Tsu06g01485 611 Gene3D - 294 557 IPR029062 -
Tsu06g01485 611 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 552 - -
Tsu06g01485 611 CDD GATase1_CTP_Synthase 298 543 IPR033828 GO:0003883|GO:0006241
Tsu06g01485 611 Gene3D - 1 292 IPR027417 -
Tsu06g01485 611 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01485 Tsu-Chr6 15221758 15228525 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01485 06 15221758 15228525 Tsu06g01485 06 15221758 15228525 ECH