Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01476 ATGTTTTTCTTCCTAACCCTGAAAAAATGTGCCTACGTTTTGAAAGATCCTATTCCTGTGGTTCCTGTTGTGCCGACTGATGCTTCGGCTTCAGGAACTAAAGAACAGCCCGTTAACACCAACGGTGAAAATGTATCTGCCGAACAAGACAAAGAAGATGATCTGTATGATTATTACAGAACCTATGAAACAGCTAGTGATGTGTGGGAGGCTCTTAGTAAAAAGTATGATACTGAAGAAGCTGGTGCGAAGAAGTATGCGGTGAGCAGTTGGAAAGACTTTCAGAATCAGCTCCGTCATAAGACAAAGGAATTTTCCATTGAAGGTCTGATTACCCGTCTTCGTATAGAAGAAGAGTCACAGAAACAAgatatgaaagaagaagaaaagatattGGTTGTttctaacaacaataaaaagaaattcggtGCGGCTCTGAAGCCTACAGGCAAACCATTGAAAAATCAGAATCAGAACCGCAATCAAAACCGAGTTAAGAATGGTAACCCGGTTAGGGGCCATAATGCTAAGCAGCATCAGCAACCACCTCCTAGAAATGACGCTGTTGATCCATTTTATTGTTTCAATTGCTGGAAAATAGGTCATATGTCCAAGAAGTGCAAAAATCCAAAGAGGCCTAAACCGGCTAACCTTGCACATATTAATGTGAATGTGGCTGATGAGCCATATACATGTATGATCACCGAAATTAATATGGTCGGTGGTACTGATGGATGGTGGATAGATACTGGCGCTACCCGCCATGTCTGTTTTGATCGTGCTATGTTTAAAACATACACGAATGCTGAAAATAAGAAGGTGCAGATAGGTAACGCTCATACTTCTGATGTTGCTGGTATTGGAGATGTTGTTTTGAAGTTCACCTCTGGAAAGACTCTTATCTTGAAAGAAGTCCTTCATGTTCctgagatgaagaagaatcttgtTTCTGGTTTCCTTTTGAATAAGGCTAgTTGGCCCCTTAGAGAATTTCATCACAGAGAGGAGAAGGAGAGAATGAACAAAGGTGGACCAGGCGGTGGTGGGCCCACTGCGGCAGCAGCGGCAGCTGCTGCTCAAAAACAGAAGACATTGTTGCAGAGAGTGGAAGGTGATATTGCCAACATCGTCGACAATTTCAGCCACCTTGTCAATGTTGCCAGGGTAAATGATCCACCTGTTAGAAATTCACAGGAAGCTTTTATGATGGAAATGCGTGCTGCTAGGATGGTCCAAGCAGCTGATTCTCTACTTAAATTGGTGTCGGAGCTGAAGCAAACTGCAATATTTTCAGGATTTGCTTCCCTTAATGACCATGTAGAACAAAGAAGGGTTGAGTTTAACCAACTGGCAGAAAAAACAGACCATACATTATCTAGAATTGGAGAGGAAGCTGCAGCTAGCCTGAAAGAGCTTGAATCCCATTATTCTTCTTCTGCGCAAAAGACTATTCAAGAGACACAACCATAG 1470 0.4061 MFFFLTLKKCAYVLKDPIPVVPVVPTDASASGTKEQPVNTNGENVSAEQDKEDDLYDYYRTYETASDVWEALSKKYDTEEAGAKKYAVSSWKDFQNQLRHKTKEFSIEGLITRLRIEEESQKQDMKEEEKILVVSNNNKKKFGAALKPTGKPLKNQNQNRNQNRVKNGNPVRGHNAKQHQQPPPRNDAVDPFYCFNCWKIGHMSKKCKNPKRPKPANLAHINVNVADEPYTCMITEINMVGGTDGWWIDTGATRHVCFDRAMFKTYTNAENKKVQIGNAHTSDVAGIGDVVLKFTSGKTLILKEVLHVPEMKKNLVSGFLLNKASWPLREFHHREEKERMNKGGPGGGGPTAAAAAAAAQKQKTLLQRVEGDIANIVDNFSHLVNVARVNDPPVRNSQEAFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRRVEFNQLAEKTDHTLSRIGEEAAASLKELESHYSSSAQKTIQETQP 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01476 489 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 22 340 488 IPR009332 GO:0003712|GO:0006357|GO:0016592
Tsu06g01476 489 SUPERFAMILY Retrovirus zinc finger-like domains 176 216 IPR036875 GO:0003676|GO:0008270
Tsu06g01476 489 MobiDBLite consensus disorder prediction 27 47 - -
Tsu06g01476 489 Pfam Surfeit locus protein 5 subunit 22 of Mediator complex 367 466 IPR009332 GO:0003712|GO:0006357|GO:0016592
Tsu06g01476 489 ProSiteProfiles Zinc finger CCHC-type profile. 194 209 IPR001878 GO:0003676|GO:0008270
Tsu06g01476 489 MobiDBLite consensus disorder prediction 29 45 - -
Tsu06g01476 489 MobiDBLite consensus disorder prediction 142 187 - -
Tsu06g01476 489 Coils Coil 111 131 - -
Tsu06g01476 489 MobiDBLite consensus disorder prediction 151 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01476 Tsu-Chr6 15055752 15066238 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01476 06 15055752 15066238 Tsu06g01476 06 15055752 15066238 ECH