Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01450 ATGGCTGCTGAATCGAAAAAAGGTGCAGATGAAATGAATAAGAAGAAGCTTCATGGTGATTCTTCAAAAGCTGAACATAACAATTCCAACATGGTTCTTTCAAAGGGTGGTGGAAGTTCACCACCATCTGATGCAAGATCATGTGTATCATCATTAGGAGATGCTTCTGGAAGTTTTAAAGAAGGGGATGTGGATCATGAATACCAATTCATAGATCAGAATGGTCCTTATGCTGCTGGTAGTTATTATGGATACTACTATCCAGGTTATGGTGGTTTCTATGGAGAGCCAGAAAATCAAGGATATTATGTTGGTGCTGATGCTGTGGATTTTCAGTATCCTgTCATGCAAGCAGATAATGGATCTTATGTGTATCTCATGCCAGGATATCAAACTGGCTACTCTTCATACATTCCTGTGAATACACCGGGCGTTGATGGCCAGTATCAATTCTACCCTCCCGGTTCTGTCTATCAACAACCAATTGGATCCCCCAGCTATTTTCCAGCTTCTTTACCTTATGGCGAGTTATTTCCATCAACATACACATGGGATTCATCTCTAACAACACAAGATGTATCATATGGGAATCGTTACAATGAATTGGCTGGTAAACCAAGCAGTAGATCTAATTTTTCTTCCCAAAGTCATACCGGTAGTGGTATGACGACAAAGTCTGTGCCCTCATCTAATGTGAGCAACTCATCAGAAGTGAAGGGTTCCTCACCATTATTAGATGGCTCATCAACTCATGTTAAGCGTAATCAGCCAAAACAATCAACCAAGGCATCCATTTCTGGTCCAGTTCTCCATTCAGATACACTGGCAAAAGGTTCTATGCCCATCGCGAAGTTTTCTGCATACAATCAAGCAAAGAGTGGATTTCCCTACCAAAACAACTTGCATAATGTGAAAGCAAATACAAAGGGATGGATTAGTACTGAAAAGCTGAAACTGAGAAGCAAGGTTAATGATCCGCTTAATGAGCAGAATCAAGGTCCTAGAACAGCTAATGCAAAAGGTGAAGTAAATTCTGGAGCTAATTCTGTGCGAATGATGGCGGTCGATAAGAGTGGAAATGGTGACAGCAAAGTCAGGACAGATCAGTATAACCTTCCTGATTTTCCAACCACATATGATCATGCACTTTTCTTTGTCATCAAATCGTACAGCGAAGACGATGTCCACAAGAGCATCAAGTACAATGTATGGGCCAGTACTCCTAATGGGAATAAGAGGCTCGACAATGCGTTTCAGGATGCCCAAAATCGAATGGAATCAAATGGAAGCAAGTGCcctgtatttcttttcttttcggTATGCTATCAAGTTTGA 1335 0.4037 MAAESKKGADEMNKKKLHGDSSKAEHNNSNMVLSKGGGSSPPSDARSCVSSLGDASGSFKEGDVDHEYQFIDQNGPYAAGSYYGYYYPGYGGFYGEPENQGYYVGADAVDFQYPVMQADNGSYVYLMPGYQTGYSSYIPVNTPGVDGQYQFYPPGSVYQQPIGSPSYFPASLPYGELFPSTYTWDSSLTTQDVSYGNRYNELAGKPSSRSNFSSQSHTGSGMTTKSVPSSNVSNSSEVKGSSPLLDGSSTHVKRNQPKQSTKASISGPVLHSDTLAKGSMPIAKFSAYNQAKSGFPYQNNLHNVKANTKGWISTEKLKLRSKVNDPLNEQNQGPRTANAKGEVNSGANSVRMMAVDKSGNGDSKVRTDQYNLPDFPTTYDHALFFVIKSYSEDDVHKSIKYNVWASTPNGNKRLDNAFQDAQNRMESNGSKCPVFLFFSVCYQV 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01450 444 PANTHER OS01G0679900 PROTEIN 17 440 - -
Tsu06g01450 444 MobiDBLite consensus disorder prediction 199 268 - -
Tsu06g01450 444 Gene3D ph1033 like domains 359 443 - -
Tsu06g01450 444 MobiDBLite consensus disorder prediction 1 52 - -
Tsu06g01450 444 MobiDBLite consensus disorder prediction 24 52 - -
Tsu06g01450 444 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 17 440 IPR045168 -
Tsu06g01450 444 MobiDBLite consensus disorder prediction 1 23 - -
Tsu06g01450 444 MobiDBLite consensus disorder prediction 199 272 - -
Tsu06g01450 444 Pfam YT521-B-like domain 384 440 IPR007275 GO:0003723
Tsu06g01450 444 ProSiteProfiles YTH domain profile. 382 444 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01450 Tsu-Chr6 14576075 14581107 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01450 K20102 - gmx:100791190 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01450 06 14576075 14581107 Tsu06g01450 06 14576075 14581107 ECH