Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01448 ATGCCCCTCTTTATCTCCGACGAAGAACTCTCGCGGTTATCCGGCGACACCACCGCCGTAGCCACCAAAGCCGACGCCTACATCCGTGGCCTTCTCAACGAACTCGACACCGTCCGCGCTAAAGCTGATGCCTCCGATATCAACGCCGAGCAGAATTGCTCCCTCGTTGAGCAGAAGTATCTATCCCTCTCTTCTGAGTTCTCCAAGCTCGAATCCCATGCCGCCAGCCTCCAATCTTCTCTTGATCAACACCTCCGTGATCTCTCTGATGCTCAAGCGAAGAATCACCAATTTCACTTGCAATTGGTTGAGAAAGATAGAGAGATAGAGAGGTTGAAGACGGAACTGAGCGAGCTGCACAAGTCAAAGAGGCAGTTGATTGAGGTGAATGAACAGAAGGATTTAGAGATTAGTGAGAAGAACACAACCATCAGGAGCTACCTTGATAAGATTGTACATTTGACGGAAAATGCTGCCCAAAAGGAAGCACGCTTTAGTGAAGTTGAGGCAGAATTGGGGAGATGCCGGGCTGCTTGCACTCGCCTCGAGCAGGAGAAGGAGATTGTTGAGAGGCAGAATGCTTGGCTTAATGAGGAGTTGACTGCTAAAATTAACAGCTTCTTAGAGTTGCGCAGAAAACTTACAGAATCAGAAACCGATATATCTTCCAAACTGGCAGATGTTGAAAGACAGTTCAGTGAATGCTCTAAATCTCTACAATGGAATAAGGATAGAGTAAGGGAGCTAGAAATGAAGCTTAAATCTATGCAAGAGGAATTAATATCAGCTAAAGATTCTGCTGCAGCCAACGAAGAGCAATTATCTGCTGAACTTTCTACTGTCAATAAGCTTAATGAGCTCTACAAAGAGAGTTCCGAGGAATGGTCTAGAAAAGCAGCGGACCTAGAGGGTGTTATAAAAGCAATGGAGTCACACCTAAAGCAAGTTGAAGATGACTACAAAGACAGACTGGAGAAGGAATTTTCTGCTAGAAAGCTGTTTGAAAAGGAGGCTGCGGATTTGAAAGAAAAGCTTGAGAAGTGTGAAGCTGATATTGAGAGAAGCAAGAAGATGAATGAACTAAGCAATCTTCAACTCACAAGCTTCTCCTCTGAACCgTGGCTGACACCTATTGTAGCTGATAACATGGATGTAGAAAATAATGCGCTAATCTCAAAAATCCCCGTTGGGGTTTCCGGAACAGCATTAGCTGCTACACTTTTGCGAGATGGGTGGAGTTTGGCAAAGATGTATGCAAAATACCAAGAGGCTGTTGATGCTTTGAGACACGAACAATTGGGAAGGAAGGAGTCAGAGGGAATTTTGCAACGGGTTCTATATGAGTTGGAGGAGAAAGCAGAAGCCATTGAGGATGAGAGAGTGGAACATGAAAAGATGGCCGATGCATACTCTTTGATGAACCAAAAATTGCAACACTCCCTCAACGAAAATTCTAACTTAGAGAAAACCATCCTGGAACTGAAGGCTGACCTCAAAAGGCATGAACGTGAATATAATCTTGCCCATAAAGAAATTGATGACCTTCGAAAACAGGTGACAGTACTTTTGAAGGAATGCCAAGACATCCAAGTTCGTTGTGGGTCATTTGGTAATAATATCAACACTAATGTAACCAATACGTCTCTAAGAACAAGTACAAATTCTGAAGCTGAAGGTGTCATATCAGAGCACCTTTTAACCTTCAAGGACATTAATGGACTAGTTGAGCAGAATGTCCAACTTAGGAGCCTTGTACGCAGTCTATCTGGACAGCTTGAAAATCAGGAGGTGGAATTCAAGGAAAAACTTGAAATGGAACTCAAAAAACATACTGAAGAAGCTGCTTCTAAAGTTGCAGCTGTTCTGCAGAGAGCGGAAGAGCAAGGGCAGATGATTGAATCGCTTCATACTTCTGTTGCAATGTATAAGAGGTTGTATGAGGAGGAGCATAGTCTTCATTTATCTCACACCCATTCTTCAGAAGCTCTTGCAGTTGCTGCAGAAGTTGGTAGAAACAACATGAATACTTCAATTGAAAGTTCACAGGAAGTTTCTAAGAAGTCTCTTGAAAAAGCTGCAGAGCGTGTAAGATGTCttgaggatgatttagcaaaatCTAGGAGTGAAATTATTGTATTACGATCAGAACGTGACAAAAATGCACTAGAAGCAAATTTTGTCAGAGAGCGGCTTGATAGCTTTATGAAGGAGTTTGAACACCAGAAAGCTGAAGCAAAAGGCATTTTAGCTAGAAATGTGGAGTTTTCTCAGCTGGTTGTCGACTACCAACGGAAATTGCGGGAGAGTTCAGAGTCATTGAATGCTGCTGAGGAGTTTTCTCGTAAACTTTCTATGGAGTTGTCGGCATTAAAGAGTGAAAAGGAAGTCTTATCAAATGCCGAAAAGAGAGCGTCTGATGAGGTTCGCAATTTATCTGAAAGGGTGTATCGCTTGCAGGGTACGTTGGGTACCATACAAAGTGCTGAAGAAGTTCGAAAGGAAGCAAGAGTTGCTGAAAGGGTAAAACAAGAAGAACATACAAAGCAATTGGAGAGGGAATGGGCTGAGGCCAAGAAAGAGTTacaggaagagagagaaaatgtgCGGAGACTTGCGCTTGATCGGGATCAGACCATGAAAAATTCTCTGAGACAGGTTGAAGATATGGGCAAAGAGTTAACTAATGCACTGGGTGCTCTTGCGTCTGCAGAATCTAGGGCTGCTGTGGCTGAGGCAAAACTCTCAAGTATTCAGAAACAAATGGATTCTGCAGATGGGAAGCTTGTCAATATGGATGCAGTGAGTGGACCTTCCACTGTATCTAGAGATGAGGTTGTTGCTGAATTGCAAACAGCAAAAGAAGAGATTGAGAAACTGAAAGAAGAAGTACATGCTAACAAAGCGCACATGCTGCagTATAAGAGCATCGCTGAGGTGAATGAAGATGCATTGAAACAAATAGAAAATGCACACGAGGACTACAAGATAGAGGTTGACAATACAAAGAAAGCTCTAGAAGCTGAAGTGCATTCACTTAGAGAGAAGGTTTCAGAGCTTGAAAAGGAATCTAGTTTGATATCAGAAGCAGTGGTATCTGCAACTGCTGGAAAGGAAGAGGCTCTGACATCTGCCTTGGCTGAGATAACAAATCTGAAAGAAGAAATTTTATCCAAAACTTCTCAAATTTCAGAGATGGAAGTTCAGATATCTGGATTTAAAGAACACCTGGACAAGGAACATCAGAAATGGCGTTCGGCTCAAACAAATTACGAAAGACAAGTTATTCTGCAGTCAGAGACTATTCAAGAGTTGACTAAAACATCTGAAATGCTATCTTCACTGCAGGATGAGGCATCTAAATTACGTAAATTAGCTGATGctcagaaaattgaaaatAATGAACTAAAGGCCAAGTGGGAAGAGGAGAAGGCGAGACTTGAGAAGTCTAAGTATGATGCTGAGAAGAAATACGATGAAATCAACGAACAGAATAAAATTCTACATAGCCAACTTGAGGCATTACATATTCAATGGGCTGAGAAGGAGCGTAATGCTGCTGGTATTTCACCTGGAAGTAGTAGTGATACATTTGCTGATGCTGGCCTTCAAAACGTTGTCAATTATCTCCGCCGTTCAAAAGAAATTGCAGAAACAGAGGTTTCATTGTTAAAACAGGAAAAGCTGCGATTGCAGTCACAGCTTGAGGGTGCTTTGAAGGCAGCAGAATCTGCAAATGCATCTCTAGAAGCTCAGCGTGTAAAATCAAGATCATTTATGTTTACTGAAGAGGAATTCAAATCGTTACAGCTTCAGGTCAGGGAAATAAACTTGCTTCGTGAGAGTAATATGCAGCTCAGGGAAGAAAATAAGCACAATTTTGAGGAATGCCAGAAATTGCGTGAACTAGCAGAAAAGGCAAGAGCTGAGAAAGACAATCTAGAGAATCTTCTAAGGGAAAGGGAAGTTGAGCTGGAAGGTCATAAAAAAGAGATCGAAACTCTAAAAACGGAAATGGAACTTCTCAATCACAAGGTTTCTGAGTTGCATGAAAGGAGTAAAAATGTTGACGTGGAGGATTATGATCGAGTGAAGAAACTTGTAAGAGATTTGCAGGATAAACTAAGAGATAGGGATGCTCAGATTGAGGAAACTGGTAAAATTCTATCAGAAAAGCAGGAATCTTTTTCACGTCTAGAGCAAAACCTTTCAAACTGCAAATTGGAGCTTTtggagaaagagaagagaattAATGAGTTTCCGAAAATTGAGGCTAACCTAAAACAGGATGCGGAAAGGAATAGGAAACTGCAGGCCCATTTTAAGAAAAGGAGTGATGTGTTATCAAGGGAAAAGGAAGACCTAGTAAAAGAGAATCAGCAACTTTCTAGACAATTAGATGAGATTAAACAACAAGTGAAAAGATCAACAAGTGATACAACTGGTGAACAAGCAATGAATCAAGAAAAGGACACCAGAATACAGATTCTGGAAAAAACTCTAGAGAGAGTTAGAGCTGAATTAAATAAAGAGAAGGAAGACAAATCCCAGGAGAAAAGTAGACGACTGAAAAATGAAAAGGCCATAATGGACTCTTACAACAATGTTGAGCTGGAGAAAAAACAGTTCATTAATGAACTTGAGAGGCATAAGGAGGCTCTAAAGCGGTTGTCTGATGAAGTCGAAAAGCTTAAGATTATTGTTGGCAATATTCCTGAGGGAACCAATGTTGCTCAACTTCTTTCGGGATCCAATGTTGATGACTTCTCTGCTCCTTATATCTCGGctgttgaaaattttgaaaaggaAGCTCATTCAGTATTTGTTGAGTTTGGTGGCCGTGCCACTCTTGGAGATGCATCAACAGTTACAGATAGTTCAGCAACTGCTACAGGTTCTCTGGCCCCTGTAACAAGCAGTTTGCCACCCAAAGCCACTGGAGATAGTGAGAAAAGACCTGCACCTACAAGATCTAGTATCGAAACTCGTAAAAGTGGTAGGAGACTGGTCAGGCCACGACTAGTAAAACCAGATGAGCCACAAGGTGACACTGAAATGTCTGATGCTGAAGTACTTGGGGGCAACAAGCCTGGACCATCTATTGACACAGAAACCCAAAGCAATTTTGCTTCGTCATCTCAACCAGTGGCTCGGAAACGTGTTGCTCCTATCTCAACATCTGAATTACGTGAAGAATCTGCTGCACCTGGTGAGAAAAGCTCTGATGTAATAGCAcctgtgttaaagaagtctaaAGGATCTGAGTCTCCAGAAGAGAGTGGCGAAGAACAACCTTCTACAACCGCAGAATTTACTAGCAGTCATCCAGTTGCTGAAGAATCATTTGAAAGTGGCGAGTTGCCACAAGGCCAAAATGAGGAAGTCAGTgaggctcaaaatgatgatgAGACAGCTGTTGGGAAGGATGAAGAATCTAAAGATCCACCACACCTGGATGGCACTAGTCAAGATGAATTACAAGCTGACAAAACTGGAATTTCAGAAGAGAATCAGGATCAACCTGCAGAAACAAAAATGATATCTGATGAGATGCAGAGGGATAATACTGAGATAGACAACCAACAATCAACATTGCCTCTGAGTGGTGAGACAGAAGAGGGAGAGTTGTTGCAAGAAGCCGGAGATCCTGAGGGTGGCTGTGATGCATCTAACATGGAAAACCAAGAATCTCGGGAGGCAACCCCTGAACCTTCCCCTGCTAGGGGTGATGATGATGCCTTAGAGGCTGGTGAGATTAATTCGCCTGAGGTTTCAAGTGATGATAAGAATGATGAAGGTGACTTGGTTGAGGATGCTGCTGATGGTTCTGATAAATTAGTTGATAACGAACCAATTACAGTTGAGAGTGATCCGGTAGCTGAGCCTGCACCTGTTGCGAGTGAGAGTAATTTGCAGAGTAGCATTGTAGAAAGCAGTCCGTCTAAATTACCTGTTTCAAAGCAAGGGACCACTAGTGTCCCCTCTAAAACAGAAGAGGTAAAGCCATCATCACCAATTAGTGATATGTCAACTACCATTAATCTACAAGAGCGAGCCCGAGAGAGGGCTCAATTAAGACAAGCAGGGCAAGCTGGGGCTAGTGTGTTTACCACTGCAGGAAGAGGTCGTGGAAGAGTTCCCCGTGGCCGGGTTGTTCGAGGTCGTGGACGAAGACCACCGTCTAGTGATGCATAA 6192 0.4168 MPLFISDEELSRLSGDTTAVATKADAYIRGLLNELDTVRAKADASDINAEQNCSLVEQKYLSLSSEFSKLESHAASLQSSLDQHLRDLSDAQAKNHQFHLQLVEKDREIERLKTELSELHKSKRQLIEVNEQKDLEISEKNTTIRSYLDKIVHLTENAAQKEARFSEVEAELGRCRAACTRLEQEKEIVERQNAWLNEELTAKINSFLELRRKLTESETDISSKLADVERQFSECSKSLQWNKDRVRELEMKLKSMQEELISAKDSAAANEEQLSAELSTVNKLNELYKESSEEWSRKAADLEGVIKAMESHLKQVEDDYKDRLEKEFSARKLFEKEAADLKEKLEKCEADIERSKKMNELSNLQLTSFSSEPWLTPIVADNMDVENNALISKIPVGVSGTALAATLLRDGWSLAKMYAKYQEAVDALRHEQLGRKESEGILQRVLYELEEKAEAIEDERVEHEKMADAYSLMNQKLQHSLNENSNLEKTILELKADLKRHEREYNLAHKEIDDLRKQVTVLLKECQDIQVRCGSFGNNINTNVTNTSLRTSTNSEAEGVISEHLLTFKDINGLVEQNVQLRSLVRSLSGQLENQEVEFKEKLEMELKKHTEEAASKVAAVLQRAEEQGQMIESLHTSVAMYKRLYEEEHSLHLSHTHSSEALAVAAEVGRNNMNTSIESSQEVSKKSLEKAAERVRCLEDDLAKSRSEIIVLRSERDKNALEANFVRERLDSFMKEFEHQKAEAKGILARNVEFSQLVVDYQRKLRESSESLNAAEEFSRKLSMELSALKSEKEVLSNAEKRASDEVRNLSERVYRLQGTLGTIQSAEEVRKEARVAERVKQEEHTKQLEREWAEAKKELQEERENVRRLALDRDQTMKNSLRQVEDMGKELTNALGALASAESRAAVAEAKLSSIQKQMDSADGKLVNMDAVSGPSTVSRDEVVAELQTAKEEIEKLKEEVHANKAHMLQYKSIAEVNEDALKQIENAHEDYKIEVDNTKKALEAEVHSLREKVSELEKESSLISEAVVSATAGKEEALTSALAEITNLKEEILSKTSQISEMEVQISGFKEHLDKEHQKWRSAQTNYERQVILQSETIQELTKTSEMLSSLQDEASKLRKLADAQKIENNELKAKWEEEKARLEKSKYDAEKKYDEINEQNKILHSQLEALHIQWAEKERNAAGISPGSSSDTFADAGLQNVVNYLRRSKEIAETEVSLLKQEKLRLQSQLEGALKAAESANASLEAQRVKSRSFMFTEEEFKSLQLQVREINLLRESNMQLREENKHNFEECQKLRELAEKARAEKDNLENLLREREVELEGHKKEIETLKTEMELLNHKVSELHERSKNVDVEDYDRVKKLVRDLQDKLRDRDAQIEETGKILSEKQESFSRLEQNLSNCKLELLEKEKRINEFPKIEANLKQDAERNRKLQAHFKKRSDVLSREKEDLVKENQQLSRQLDEIKQQVKRSTSDTTGEQAMNQEKDTRIQILEKTLERVRAELNKEKEDKSQEKSRRLKNEKAIMDSYNNVELEKKQFINELERHKEALKRLSDEVEKLKIIVGNIPEGTNVAQLLSGSNVDDFSAPYISAVENFEKEAHSVFVEFGGRATLGDASTVTDSSATATGSLAPVTSSLPPKATGDSEKRPAPTRSSIETRKSGRRLVRPRLVKPDEPQGDTEMSDAEVLGGNKPGPSIDTETQSNFASSSQPVARKRVAPISTSELREESAAPGEKSSDVIAPVLKKSKGSESPEESGEEQPSTTAEFTSSHPVAEESFESGELPQGQNEEVSEAQNDDETAVGKDEESKDPPHLDGTSQDELQADKTGISEENQDQPAETKMISDEMQRDNTEIDNQQSTLPLSGETEEGELLQEAGDPEGGCDASNMENQESREATPEPSPARGDDDALEAGEINSPEVSSDDKNDEGDLVEDAADGSDKLVDNEPITVESDPVAEPAPVASESNLQSSIVESSPSKLPVSKQGTTSVPSKTEEVKPSSPISDMSTTINLQERARERAQLRQAGQAGASVFTTAGRGRGRVPRGRVVRGRGRRPPSSDA 2063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01448 2063 MobiDBLite consensus disorder prediction 1965 2017 - -
Tsu06g01448 2063 Coils Coil 1388 1415 - -
Tsu06g01448 2063 Coils Coil 840 881 - -
Tsu06g01448 2063 Coils Coil 689 709 - -
Tsu06g01448 2063 Coils Coil 144 217 - -
Tsu06g01448 2063 Coils Coil 102 129 - -
Tsu06g01448 2063 Coils Coil 1486 1520 - -
Tsu06g01448 2063 Coils Coil 787 814 - -
Tsu06g01448 2063 MobiDBLite consensus disorder prediction 1620 2063 - -
Tsu06g01448 2063 Gene3D - 872 1034 - -
Tsu06g01448 2063 MobiDBLite consensus disorder prediction 1759 1794 - -
Tsu06g01448 2063 Coils Coil 331 358 - -
Tsu06g01448 2063 Coils Coil 1444 1478 - -
Tsu06g01448 2063 Coils Coil 1296 1351 - -
Tsu06g01448 2063 Coils Coil 299 326 - -
Tsu06g01448 2063 Coils Coil 600 628 - -
Tsu06g01448 2063 Coils Coil 1532 1566 - -
Tsu06g01448 2063 Coils Coil 239 273 - -
Tsu06g01448 2063 Coils Coil 1048 1068 - -
Tsu06g01448 2063 PANTHER NUCLEOPROTEIN TPR 1 2044 - -
Tsu06g01448 2063 Pfam TPR/MLP1/MLP2-like protein 1047 1174 IPR012929 GO:0006606
Tsu06g01448 2063 Coils Coil 1213 1251 - -
Tsu06g01448 2063 Coils Coil 1268 1288 - -
Tsu06g01448 2063 MobiDBLite consensus disorder prediction 1649 1682 - -
Tsu06g01448 2063 Coils Coil 477 532 - -
Tsu06g01448 2063 PANTHER NUCLEOPROTEIN TPR-RELATED 1 2044 - -
Tsu06g01448 2063 MobiDBLite consensus disorder prediction 1698 1719 - -
Tsu06g01448 2063 Coils Coil 446 466 - -
Tsu06g01448 2063 MobiDBLite consensus disorder prediction 1620 1644 - -
Tsu06g01448 2063 Coils Coil 1104 1177 - -
Tsu06g01448 2063 Coils Coil 942 969 - -
Tsu06g01448 2063 MobiDBLite consensus disorder prediction 1474 1490 - -
Tsu06g01448 2063 MobiDBLite consensus disorder prediction 1467 1491 - -
Tsu06g01448 2063 Coils Coil 900 920 - -
Tsu06g01448 2063 MobiDBLite consensus disorder prediction 1841 1855 - -
Tsu06g01448 2063 Coils Coil 74 94 - -
Tsu06g01448 2063 MobiDBLite consensus disorder prediction 1800 1831 - -
Tsu06g01448 2063 Coils Coil 977 1022 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01448 Tsu-Chr6 14538650 14569285 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01448 K09291 - gmx:100811882 2821.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01448 06 14538650 14569285 Tsu06g01448 06 14538650 14569285 ECH