LGRPv2

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Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu02g03905	ATGGATGTTTGGGAGATGGACCCAGATATGATATGTTATTTTGATCTCATTAACATGGTAAAACATTGTGGCAAGTATCATAGTGTTGAAAAAGTTCAATGGATGAAAACTGATTATGGAGATAACTTTGATTTTGGGTTGAGACCTTTGGAAAATGACAGTCACATAATTAAGATGATTGAGGGTGCAAGGAAGAATGGAAATGAGGTAGAGATATATTTCCAACATTCAGTAGTTGAAAATCCTGAGTTTGTAGAGTTTAATGAAGACGAGATGGCAATGCTTGAGCAAATTATTAGATCTGCAACCAATTCCAATGGTGGCAGTCAATGTGTCGATCCACCTATTCAAGAAGATGGAGCAATAGATGAAGAGatttatgaaaatgattttcCTACAGTTGAAGAACTTATCCAACAAGAGCAACAAATGGTTGAAGAGGAAGTAATAGTTGAAAATGTAGTTTCGAAAAAAAAGGGGAAGGCGGAGAGGAAAAGTAATAAAGTGAacacaaaaaaaagtaagaaaaaaaataagaaaaaaagtaagGAAGTGTTACCACCAAGTGAGAGTGATTCATCAAGTGGTGGTGATGATTATCATGCTGAGTTTAGAGAGGCAGCAGGACATAGAGAGACATATTCACAAAACGTACAAGGGGAGCCAAGTGGAGAGATTAGACCTACcattaatgatgatgaagatgatgatttatATCACTCAGAGGAATTGAAGAGTCCAATAAGTactgatgatgaggatgatggaAAACATGTATTTCCTCAATTTAATGAATCTGCTGTGTTTGGAGAAGTTCAGTTGGAGAAAGGAATGGAATTTCCTACTTTGGCGGTGTTTAAACATGCAGAGATTTATGATTATGTCAAACGTGAGTTCAATCTGATGCTTGATGACTCTAAGATCAATAGAGCAGTGAGGGAAGCGAGGGAATTGGTCGAAGGTTATCATGGTGGTCAACTACTATCTGTTGTGGGACAAGATGCAAATAATCATATATTTGTTGTTGCCTATGCAATTGTGGATGTTGAAAACAAAGACAACTGGAAATGGTTTCTAACATTGTTGCATGAAGACTTAGGTGACTACAAACAACATGGGTGGAACTTTATGTCAGATATGCAAAAGGGTCTTATACCTGCCATGCAGGAAGTCATGCCTGGTGTGCCACATAGATATTGTGCTATGCATCTGTGGAGGAACTTTACAAAAAATTGGATGGATAAAGAACTTAGAGGTGTGGTGTGGGATTGTGCCAGGTCCACCACTGTTGCACAGTTCAATCGCCATATGGAAAAAGTGAAGAGATTGAACAAAAAAGCATGGGAATATCTTAATAAGTGGCCTAAGGAAGCTTGGACAAGGGCATATTTCAAGGAAAATTCAAAAGTTGACAGTATAACTAACAACAATTGTGAGGTTTTCAATGCAAAAATCCTAAATTACAGAGGGAAACCAATTTTAACTTTAGCTGAAGAGATTAGATGCTATGTCATGAGAACAATGAGTTCAAAAAAGTTCAAATTTGCCGATAAAATTGGACCTCTTTGTCCAGTGCAACAGAGTCGATTGGAGAATGAGAAAATTCAAAGCAATAGTTGGACTCCTTGTTGGACAGGCCCCCCTCGTCTAAGATATCAAGTTCAAAGTGGCAGTACAAAAGTTGACGTGGATCTTGATACAGGGACCTCGAAGCATCAGCGAAGACGCAGCGAAGACGCAGCGAAGACGCAGCGAACGAAGTCAGAGAGGAAAAGGGCATTAGCGAAATCGCAGCGAATCAGTGGCGAACGTGTTCGCTACAGCGAATCAATAGCGAAGCATCAGCGAACGAAGTCAGAGAGGAAAAGCCGTCTCACTGCTCATTCTGTAGGTGGAGATCGGCATTCACTTTCATTTCTAATCAAATTCTGTTTTCCGTGTGGATTATATACAAGACTAGTCAAGATGgTGAAGTTTACAGCTGATGAGTTACGTCGTATTATGGACTACAAACACAATATTCGTAATATGTCTGTCATTGCTCATGTTGATCACGGAAAATCAACTTTGACAGATTCTCTTGTGGCGGCTGCTGGCATTATAGCACAAGAGGTTGCAGGAGATGTTAGGATGACAGATACCCGTCAAGACGAAGCTGAGCGTGGTATAACGATAAAGTCAACTGGTATCTCTCTCTACTATGAGATGAGTGATGATGATTTGAAGAATTTCAAAGGTGAACGTGAAGGGAACAAGTACCTTATAAACCTGATCGACTCTCCTGGGCATGTCGATTTCTCATCTGAGGTCACGGCTGCACTTCGCATCACCGATGGAGCACTTGTGGTGGTGGATTGTGTCGAAGGGGTTTGTGTACAAACACAAACAGTGTTGAGACAAGCACTAGGAGAAAGGATTAAACCTGTTTTAACTGTAAACAAAATGGATAGATGTTTTCTTGAGCTTCAACTCGATGCTGAAGAGGCCTACTTGACGATTCAGAGGGTCATTGAGAGTGCCAATGTCATCATGGCAACCTATGAAGATCCATTGCTTGGTGATGTTCAAGTGTATCCTGAGAAAGGAACTGTTGCTTTCTCTGCTGGTTTGCATGGTTGGGCTTTCACTCTGACCAACTTTGCAAAGATGTATGCCACCAAATTTGGTGTTAACGAGTCAAAGATGATGGAGAGGCTCTGGGGTGAAAATTTCTTTGATCCTGCCACTAAGAAATGGACCACCAAGAACACTGGTTCAGCTACGTGCAAGCGTGGCTTTGTTCAGTTCTGTTATGAGCCAATCAAGCATATTATTGAACTTTGTATGACTGATCAGAAGGATAAACTGTGGCTGATGCTGCAGAAGCTCAAGGTGAATTTGAAGTCGGAGGAGAAAGAATTAACAGGAAAGGCTTTGATGAAGCGTGTTATGCAAAGCTGGCTCCCGGCTAGCAGTGCCCTTTTAGAGATGATGATTTTCCATCTTCCTTCTCCTTCCAAGGCTCAAAAATACCGTGTCGATAATTTGTATGAGGGTCCCCTTGATGATCCTTATGCTTCTGCAATCCGAAATTGTGATCCTGAAGGACCTTTAATGCTTTACGTTTCAAAGATGATTCCTGCCTCTGATAAGGGTAGGTTTTATGCTTTTGGTCGTGTGTTTTCAGGTAAGGTTTCAACTGGTATGAAGGTCAGGATTATGGGACCAAATTACATCCCCGGGGAGAAGAAAGATCTGTATGTGAAAAGTGTTCAGAGAACGGTTATTTGGATGGGAAAGAAGCAAGAAACAGTGGAGGATGTCCCTTGTGGTAATACAGTTGCCATGGTGGGTTTGGATCAATTCATTACCAAGAATGCTACTTTAACAAATGAGAAAGAAATCGACGCACACCCTATTCGAGCTATGAAATTTTCAGTGTCACCTGTGGTAAGTGTAGCAGTTACATGTAAGGTAGCATCGGAAGTTCCCAAGCTTGTCGATGGCCTTAAACGGTTAGCGAAGTCAGATCCCATGGTGGTGTGCACAATTTCAGAGACTGGAGAACATATCGTAGCTGCTGCTGGTGAGTTACACCTTGAAATCTGCTTGAAGGATTTGCAGGACGATTTCATGAATGGAGCCGAGATTTCAATATCCGACCCTATTGTCTCTTTCCGTGAGACTGTGCTTGAGAAATCTAGCCATATTGTGATGAGCAAGTCACCAAACAGACACAACCGCTTATATATGGAAGCAACGCCAATGGAGGAACGGCTTGCAAAGGCCATCGATGATGGGAAGATTGGATTGAGAGATGACCCTAAAAACCGTTCTAAAATACTGTCTGAAGAGTTTGGTTGGGACAAGGATCTCACCAAGAAAATATGGTGTTTCGGCCCCGAGACAACAGGTCCCAACATGGTGGTAGATACATGTAAAGGCGTACAATATCTGAATGAAATCAAGGATTCTGTTGTTTCTGGATTCCAGACGGCATCAAAACAAGGTCCAATGGCCGATGAGAGCATGTGGGGGGTTTGTTTTGAGATTTGCGACGTTGTTCTTCATGCCGATGCCATTCACAGAGGAGGTGGCCAGATCAGTCCAACAGCTAGAAGGGTGTGCTATGCAGCCATGCTTACAGCAAAGCCGCGACTTCTAGAACCGGTGTATCTGGTGGAAATACAAGCACCTGAACATGCTCTTGGAGGTATATATAGTGTTCTTAATCAGAGAAGAGGGCATGTTTTTGAGGCAATCCAGAGGCCTAACACTCCACTTTACAATGTCAAGGCACATTTACCTGTTATTGAGTCATTTAAATTCAATGAAGCACTGAGGGCTCAAACAGGAGGACAGGCTTTCCCTCAGTTGGTATTTGACCATTGGGATATGATGCCATCTGATCCACTGGAACCTGGGACTCCGGCTGCTGCACGTGTTAGGGAGATAAGAATAAAGAAAGGTTTGAAGGAACAAATGGCGCCTCTCACCGACTTTGAGGACAGGCTTTGA	4497	0.4132	MDVWEMDPDMICYFDLINMVKHCGKYHSVEKVQWMKTDYGDNFDFGLRPLENDSHIIKMIEGARKNGNEVEIYFQHSVVENPEFVEFNEDEMAMLEQIIRSATNSNGGSQCVDPPIQEDGAIDEEIYENDFPTVEELIQQEQQMVEEEVIVENVVSKKKGKAERKSNKVNTKKSKKKNKKKSKEVLPPSESDSSSGGDDYHAEFREAAGHRETYSQNVQGEPSGEIRPTINDDEDDDLYHSEELKSPISTDDEDDGKHVFPQFNESAVFGEVQLEKGMEFPTLAVFKHAEIYDYVKREFNLMLDDSKINRAVREARELVEGYHGGQLLSVVGQDANNHIFVVAYAIVDVENKDNWKWFLTLLHEDLGDYKQHGWNFMSDMQKGLIPAMQEVMPGVPHRYCAMHLWRNFTKNWMDKELRGVVWDCARSTTVAQFNRHMEKVKRLNKKAWEYLNKWPKEAWTRAYFKENSKVDSITNNNCEVFNAKILNYRGKPILTLAEEIRCYVMRTMSSKKFKFADKIGPLCPVQQSRLENEKIQSNSWTPCWTGPPRLRYQVQSGSTKVDVDLDTGTSKHQRRRSEDAAKTQRTKSERKRALAKSQRISGERVRYSESIAKHQRTKSERKSRLTAHSVGGDRHSLSFLIKFCFPCGLYTRLVKMVKFTADELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMSDDDLKNFKGEREGNKYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTQTVLRQALGERIKPVLTVNKMDRCFLELQLDAEEAYLTIQRVIESANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYATKFGVNESKMMERLWGENFFDPATKKWTTKNTGSATCKRGFVQFCYEPIKHIIELCMTDQKDKLWLMLQKLKVNLKSEEKELTGKALMKRVMQSWLPASSALLEMMIFHLPSPSKAQKYRVDNLYEGPLDDPYASAIRNCDPEGPLMLYVSKMIPASDKGRFYAFGRVFSGKVSTGMKVRIMGPNYIPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEIDAHPIRAMKFSVSPVVSVAVTCKVASEVPKLVDGLKRLAKSDPMVVCTISETGEHIVAAAGELHLEICLKDLQDDFMNGAEISISDPIVSFRETVLEKSSHIVMSKSPNRHNRLYMEATPMEERLAKAIDDGKIGLRDDPKNRSKILSEEFGWDKDLTKKIWCFGPETTGPNMVVDTCKGVQYLNEIKDSVVSGFQTASKQGPMADESMWGVCFEICDVVLHADAIHRGGGQISPTARRVCYAAMLTAKPRLLEPVYLVEIQAPEHALGGIYSVLNQRRGHVFEAIQRPNTPLYNVKAHLPVIESFKFNEALRAQTGGQAFPQLVFDHWDMMPSDPLEPGTPAAARVREIRIKKGLKEQMAPLTDFEDRL	1498

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu02g03905	1498	TIGRFAM	small_GTP: small GTP-binding protein domain	675	823	IPR005225	GO:0005525
	Tsu02g03905	1498	PANTHER	TRANSLATION ELONGATION FACTOR EF-2 SUBUNIT	656	1497	-	-
	Tsu02g03905	1498	Pfam	Elongation factor G C-terminus	1379	1465	IPR000640	-
	Tsu02g03905	1498	PRINTS	GTP-binding elongation factor signature	808	817	IPR000795	GO:0003924\|GO:0005525
	Tsu02g03905	1498	PRINTS	GTP-binding elongation factor signature	676	689	IPR000795	GO:0003924\|GO:0005525
	Tsu02g03905	1498	PRINTS	GTP-binding elongation factor signature	756	766	IPR000795	GO:0003924\|GO:0005525
	Tsu02g03905	1498	PRINTS	GTP-binding elongation factor signature	772	783	IPR000795	GO:0003924\|GO:0005525
	Tsu02g03905	1498	PRINTS	GTP-binding elongation factor signature	720	728	IPR000795	GO:0003924\|GO:0005525
	Tsu02g03905	1498	Pfam	Elongation factor Tu GTP binding domain	672	997	IPR000795	GO:0003924\|GO:0005525
	Tsu02g03905	1498	SMART	EFG_IV_2	1261	1377	IPR005517	GO:0005525

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu02g03905	Tsu-Chr2	45005109	45095866	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tsu02g03905	656	1498	Eukaryotic Initiation Factors Gene Family	AT1G56070	84.816	0.0	1518

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu02g03905	K03234		-	sind:105175070	1496.49

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tsu02g03905	02	45005109	45095866	Tsu02g03905	02	45005109	45095866	ECH

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