Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00510 ATGGACCTTTCTCCCATTATCCTCTTTTTCACTATTATCTTCACCATCCTTGCTGCCGTCTCCGGTAGCCGCGACCTTCCCGGAGACTATATCCGATTACCTTCTCAAGCCTCCAAGTTCTTCCATGAACCTGAAAATGATGACAACGTTCAAGGGACTAGATGGGCTATCTTACTTGCTGGTTCTAATGGTTACTGGAATTATAGGCATCAGGCTGATGTTTGCCATGCCTATCAAATATTGAAGAAAGGTGGCTTAAAAGATGAAAACATTATTGTTTTCATGTATGATGACATTGCTTCCAATTTCGAGAATCCAAGGCCTGGTGTCATAATTAACAAACCAGATGGTGGTGATGTTTATGAAGGAGTTCCAAAGGATTACACTGGTGCAGAAGTACATGCTGACAATTTCTATGCTGCTTTACTTGGAAATAAATCAGCTATTACAGGTGGGAGTGGGAAAGTTGTGGATAGTGGCCCCAATGATCATATTTTTGTATACTACACTGATCATGGAGGTCCTGGGGCTCTTGGTATGCCTGTTGGTCCTTACCTGTATGCATCTGATCTGAATGAAGtcttaaagaaaaaacatgCCTCTGGAGGATATAAGAGCCTAGTATTTTATCTCGAGGCATGTGAATCTGGGAGTATCTTTGAAGGTCTTCTACCGGAAGATATTAATATCTACGCGACAACAGCTTCAAATGCGAGAGAAAGCAGTTGGGGAACATATTGCCCTGGCGAGTACCCTCCCCCTCCTCCAGAGTACTCAACCTGCTTGGGTGACCTGTACAGCATTGCTTGGATGGAAGACAGTGACGTACACAATTTGCGAACTGAAAGTTTGCACCAGCAATATAAATTAGTTAAGGATAGGACTATTAATGGAGCATCCTATGGTTCTCATGTGATGGAGTATGGTGATGTAGGACTTAGCAACAATCATCTTTTCCTATATTTGGGAACAAATCCTGCTAATGATAATATTAGTTTTGTGGATGAAAGTGCCTTAAAATTGAGATCACCTTCAACAGCAGTTAACCAAAGGGATGCCGATCTCGTCCATTTCTGGGATAAGTTCCGCAAAGCTCCTGAGGGTTCTCCGCGGAAAAATGAAGCTCAGAAACAAGTTTTGGAAGCAATGTCTCACAGGATGCATGTAGACAACAGTGTGGAACTGATTGGGAAGCTCTTATTCGGCATTGAAAAGGGTCCTGAACTGCTCAAGGCAGTTAGACCTTCTGGATCACCGCTTGTTGATAACTGGGACTGCCTTAAAACCACGGTAAGGACTTTTGAGACACATTGCGGATCCCTATCTCAGTATGGTATGAAACATATGAGGTCCTTTGCGAACATCTGCAATGCAGGAATACCGAATGAGCAAATGTTCGAGGCCTCAGCACAAGCTTGTGCTAGTATTCCTGCCAACCCCTGGAGTTCTCTACAAGGGGGTTTCAGTGCATAG 1473 0.4311 MDLSPIILFFTIIFTILAAVSGSRDLPGDYIRLPSQASKFFHEPENDDNVQGTRWAILLAGSNGYWNYRHQADVCHAYQILKKGGLKDENIIVFMYDDIASNFENPRPGVIINKPDGGDVYEGVPKDYTGAEVHADNFYAALLGNKSAITGGSGKVVDSGPNDHIFVYYTDHGGPGALGMPVGPYLYASDLNEVLKKKHASGGYKSLVFYLEACESGSIFEGLLPEDINIYATTASNARESSWGTYCPGEYPPPPPEYSTCLGDLYSIAWMEDSDVHNLRTESLHQQYKLVKDRTINGASYGSHVMEYGDVGLSNNHLFLYLGTNPANDNISFVDESALKLRSPSTAVNQRDADLVHFWDKFRKAPEGSPRKNEAQKQVLEAMSHRMHVDNSVELIGKLLFGIEKGPELLKAVRPSGSPLVDNWDCLKTTVRTFETHCGSLSQYGMKHMRSFANICNAGIPNEQMFEASAQACASIPANPWSSLQGGFSA 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00510 490 PIRSF AE 3 490 IPR043577 GO:0004197|GO:0051603
Tsu01g00510 490 Pfam Peptidase C13 family 54 323 IPR001096 GO:0006508|GO:0008233
Tsu01g00510 490 PANTHER HEMOGLOBINASE FAMILY MEMBER 5 489 IPR001096 GO:0006508|GO:0008233
Tsu01g00510 490 Gene3D - 52 347 - -
Tsu01g00510 490 Gene3D - 350 478 IPR046427 -
Tsu01g00510 490 PIRSF Legumain 4 490 IPR001096 GO:0006508|GO:0008233
Tsu01g00510 490 PANTHER VACUOLAR-PROCESSING ENZYME 5 489 - -
Tsu01g00510 490 PRINTS Hemoglobinase (C13) cysteine protease signature 127 142 IPR001096 GO:0006508|GO:0008233
Tsu01g00510 490 PRINTS Hemoglobinase (C13) cysteine protease signature 155 174 IPR001096 GO:0006508|GO:0008233
Tsu01g00510 490 PRINTS Hemoglobinase (C13) cysteine protease signature 80 109 IPR001096 GO:0006508|GO:0008233
Tsu01g00510 490 PRINTS Hemoglobinase (C13) cysteine protease signature 204 220 IPR001096 GO:0006508|GO:0008233
Tsu01g00510 490 PRINTS Hemoglobinase (C13) cysteine protease signature 55 79 IPR001096 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00510 Tsu-Chr1 4459004 4463975 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00510 K01369 - gmx:547700 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00510 01 4459004 4463975 Tsu01g00510 01 4459004 4463975 ECH