Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00506 ATGCAATCGAGGGTTATGGCATCTGAAGAAGGAAAATCAAAAGGGTTATCATTAGGATCCTTGCGTTtacttgttgtttttgttgctcTATGTGTTGTGTTTTCTGTCATAAGTATATATACTCTTAAACATTTTGGAATTGAGAATGTTGTTACTACAATGAGTTCAAGTTTTCAACCATGTGTTGAGGAACATGCTGGTTTAGAACAATGGATTAAACCACCTTCAAATCTGATCCATAATATGAGTGATAAAGAACTTCTTTGGAGAGCTTCTTTAGTTCCTAAGATTAAGGATTACCCTTTTCAAAGAGTTCCAAAGATTGCTTTTATGTTCCTTACTAAAGGACCATTGCCTCTTGCACCTCTTTGGGAGAGGTTTTTGAAAGGACATGAGAGtctttttagtatatatattcaTCCTTTGCCTTCATATCAAGCTCAGTTTCCTCCTTCAtctgttttttataaaaggcAAATCCCTAGTCAGATTGCTGAGTGGGGAAGGATGAGTATGTGCGACGCTGAAAGAAGACTACTTGCCAATGCATTACTCGACATCTCCAATGAGTGGTTTATTCTATTGTCCGAATCATGCATCCCTCTCTACAAATTCAGTCTAGTCTACCACTACTTAATGAAATCCAAATACAGCTATGTTGGCGCATTTGATGATCCCGGTCCATACGGAAGAGGACGCTATAACCCAAACATGGCCCCTCTAGTAGACATTACAAAGTGGCGTAAAGGCTCTCAATGGTTCGAAGTAAATCGAAAGCTAGCCGTCAACATTGTGGAAGACACCACATTTTATCCAAAGTTCGAACAATATTGTAGACCGGCATGTTACGTAGACGAACACTATTTTCCAACTATGTTAACGATTCAAGCGGGGGATGCGTTGGCGAACCGGAGCATAACTTGGGTGGACTGGTCTAGAGGTGGAGCCCACCCGGCTACATTTGGAAGATCAGATATTACAAAGGAGTTTTTCAATAGAGTTCATGGAGGTCAAAAATGCATATATAATGATAGAAACTCTTCACTTTGTGTTttatttgcaagaaaatttGCTCCTAGTACATTGGAACCTTTGTTAGATATGGTGAAAGCAAAAGTCTTAGACTTctga 1131 0.3722 MQSRVMASEEGKSKGLSLGSLRLLVVFVALCVVFSVISIYTLKHFGIENVVTTMSSSFQPCVEEHAGLEQWIKPPSNLIHNMSDKELLWRASLVPKIKDYPFQRVPKIAFMFLTKGPLPLAPLWERFLKGHESLFSIYIHPLPSYQAQFPPSSVFYKRQIPSQIAEWGRMSMCDAERRLLANALLDISNEWFILLSESCIPLYKFSLVYHYLMKSKYSYVGAFDDPGPYGRGRYNPNMAPLVDITKWRKGSQWFEVNRKLAVNIVEDTTFYPKFEQYCRPACYVDEHYFPTMLTIQAGDALANRSITWVDWSRGGAHPATFGRSDITKEFFNRVHGGQKCIYNDRNSSLCVLFARKFAPSTLEPLLDMVKAKVLDF 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00506 376 PANTHER - 11 369 - -
Tsu01g00506 376 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 11 369 IPR044174 GO:0016757
Tsu01g00506 376 Pfam Core-2/I-Branching enzyme 108 334 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00506 Tsu-Chr1 4422876 4428618 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00506 - - gmx:100785919 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00506 01 4422876 4428618 Tsu01g00506 01 4422876 4428618 ECH