Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00503 ATGAAGAGAGGGAagagtgatgatgatgagaaagtGGGACCCATGTTCCCAAGACTCCATGTCAATGACACAACTGACAAAGGAGGACCAAGAGCACCACCAAGGAATAAGATGGCACTCTATGAACAGTTTAGTGTTCCCTTTCAAAGATTCAATCCCAATTCAAATTCTTCTAATTCACTTCCTCCAACACCTTCCTCCATCATGGGAAGTGACCCTGAGAGAAGCTGCCTCTTCCCAGTTCGTTTACACCATCCAGCTGAAAGTTATATTTCTCACCAATCTAATGGAGCAAATTTGGACACTTTGTCAGCACAACCTGATCAGAGAAAAGACATGAGTAAAAAGGGCCAAGGGAAGCTGCAAGTAAGCCCAAGTAGACATAAAACAGCAATGTCTGTCGAAAGCGTATTGACAGGAGAAATTATTGACAGTCCAGTGAGGCAAACCAAGAAGATTCCAGATGAAGAGGGTCAGCGTTGTTCTGTGTCAAATATAAGCAGGTTACATAACAGTGATGCTTGCATACGAGAGGAATCCAATGACATTGAACATAGTGACGATCTTCTTAACTCAGAAGGAAGTGACGATCTTTCCAAAATCTCCACTCTAGAAAATTTGTCAAGCCTGAAACTTTCTCCTGATGGTGTCGTACAGATTTTAGGTCAACAACTTTTTTGGAAAGCAAGACGAAAAATTACCAATCAACAGAGAATGTATGCGGTCCAAGTGTTTGAGTTGCACAGACTGATAAAGGTCCAACAGCTGATTGCTGGATCATCAGATCTTTTGCTTGAAGATGCTGCTATTTTGGGAAAATTTCCTCTGCAGGAGGAATCTACTCCTAAAAGTCTCTCATTGGAAGTTGTTGTTGAACCTCAGACACAAAATCATAAACAGCAAGACCATTCTGAAAACCTAAACCGTGAATCGGAATGTTCTGCTGAAAATGGTGTAGGGAAAACATCCTTTACATACCAAAACTATGGTAGCCACTTTTCGAATTACACCCCTTTTCCTGGAAATCCACAACAGGAAAGTTCAGGTTCTCAGTGTTTCAATCAGTCACCTGGACATCAGTGGTTAATTCCTGTTATGTCTCCTTCCGAGGGGCTTGTCTACAAGCCATTTCCTGGTCCTGGATTTAACGGAGCAGTGTATGGAGGATGTGGGCCGTTTGGACAAGGTCCTTCGGAGGGTACAGTCATGAATCCTAACTACGGAGTTCCAAATTTTCATCAAGCGATTGCAGTTTCACCGTTCATTCCTCCAAGCAGTTATGCCTACTTCCCTCCTCATGGCGTGCCAGCAGCAATGAATCAATCAGCATCAGGGTCAGTTGTTGAACAGGCAAGCCAGTTTGTTGCACACAGTTCTCACGATCAAAACAGTAATTCATCTTTAGTTCGAGCCAATTTTGACACTCATAATCAAAGCCCGTGTAATTTGTCAAATCAGAAATTTGGAACCATATCACATGTCACAAAGTCTCGGTCAACTAGGGAGAGAGAGTTAGCAAGTAGTCCTACTGAAAAGGCACAAGGAATTAGAATAGAGAAATCTTCTTCCTTTACGGTTCCATTAGTATCAGATGAAGACTTTCAATCGTTTGAAACAAGACAGAAACCGCAGGTAATCAGAGTTGTGCCACATAACTCACGATCTGCAACGGTATCAGCTGCTAGAATTTTCCAGTCGATCCAAGAAGAGAGAAAACAGTATGATATAGTCTAG 1734 0.4175 MKRGKSDDDEKVGPMFPRLHVNDTTDKGGPRAPPRNKMALYEQFSVPFQRFNPNSNSSNSLPPTPSSIMGSDPERSCLFPVRLHHPAESYISHQSNGANLDTLSAQPDQRKDMSKKGQGKLQVSPSRHKTAMSVESVLTGEIIDSPVRQTKKIPDEEGQRCSVSNISRLHNSDACIREESNDIEHSDDLLNSEGSDDLSKISTLENLSSLKLSPDGVVQILGQQLFWKARRKITNQQRMYAVQVFELHRLIKVQQLIAGSSDLLLEDAAILGKFPLQEESTPKSLSLEVVVEPQTQNHKQQDHSENLNRESECSAENGVGKTSFTYQNYGSHFSNYTPFPGNPQQESSGSQCFNQSPGHQWLIPVMSPSEGLVYKPFPGPGFNGAVYGGCGPFGQGPSEGTVMNPNYGVPNFHQAIAVSPFIPPSSYAYFPPHGVPAAMNQSASGSVVEQASQFVAHSSHDQNSNSSLVRANFDTHNQSPCNLSNQKFGTISHVTKSRSTRERELASSPTEKAQGIRIEKSSSFTVPLVSDEDFQSFETRQKPQVIRVVPHNSRSATVSAARIFQSIQEERKQYDIV 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00503 577 MobiDBLite consensus disorder prediction 92 130 - -
Tsu01g00503 577 MobiDBLite consensus disorder prediction 47 71 - -
Tsu01g00503 577 PANTHER FLOWERING PROTEIN, PUTATIVE-RELATED 191 577 - -
Tsu01g00503 577 PANTHER FLOWERING PROTEIN, PUTATIVE-RELATED 108 192 - -
Tsu01g00503 577 PANTHER FLOWERING PROTEIN, PUTATIVE-RELATED 1 112 - -
Tsu01g00503 577 MobiDBLite consensus disorder prediction 1 73 - -
Tsu01g00503 577 MobiDBLite consensus disorder prediction 92 107 - -
Tsu01g00503 577 MobiDBLite consensus disorder prediction 1 16 - -
Tsu01g00503 577 PANTHER PROTEIN EARLY FLOWERING 3 108 192 IPR039319 GO:2000028
Tsu01g00503 577 PANTHER PROTEIN EARLY FLOWERING 3 191 577 IPR039319 GO:2000028
Tsu01g00503 577 PANTHER PROTEIN EARLY FLOWERING 3 1 112 IPR039319 GO:2000028
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00503 Tsu-Chr1 4405425 4409406 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00503 K12125 - gmx:100818279 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00503 01 4405425 4409406 Tsu01g00503 01 4405425 4409406 ECH
Tsu07g00833 07 6817790 6823406 Tsu01g00503 01 4405425 4409406 ECH