Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00501 ATGGATTTCATGAAAGTTTTCGATCAAACCGTTCGAGAAATAAAAAGAGAGGTGAATTTGAAGGTGCTTAAGGTTCCTGAAATCGAACAGAAGGTTTTGGATGCAACTGATGATGAACCTTGGGGTCCTCATGGTACCGTGCTGGCAGAGATTGCAACGGCTaccaaaaaattTACTGAATGTCAGCTGGTTATGAATGTTCTTTGGACAAGATTGAGTGAAACTGGAAAGGATTGGCGATATGTATACAAGGCATTAGCTGTTATAGAGTATTTGGTATCACATGGATCTGAACGGGCAGTAGATGACATTATAGAACATACTTTTCAGATCTCTGCACTTTCTAGTTTTGAATATGTTGAGCCCAGTGGGAAGGATGTGGGACTCAATGTAAGGAAGAAGGCAGAAAACATTGTGGCCCTTTTGAATGATAGAGAAAAGATACATGATATAAGAAATAAAGCTGCTGCAAATCGTGACAAGTATATTGGAGTTTCATCTAGTGGAATGACATACAAATCCGGGACAACCTCCCATAGCAGTAGTAAATATGGAGGCTTTGGTTCAAGTGGTGATAGGTTTAGTGATAGCTATGGAGACAAGGGGCGCTATgatgaagcaaaagtagacaaagATTACTCAGGAAAATCACGCTATGGTGGCTCAAGTTACGATGAAGAGAACTCCTTCAAAAAGGGTTCTGCACGGTCTGTCAGCAAAAGTAATGAGAAGATATCATCTAGAACATCAAAGTCATCTGCTAATGCAAGTTCAGTTCCTTCTCAAAGTTCAAATGTACCCGCAAACAATACTGAGGATGACTTTGATGATTTTGATCCAAGAGGAACATCCACTAAGGCTTCAGCTGTAAGCTCAAACCAGGTTGATCTCTTTGGACAAGATTTGATTGGTGACTTAATGGATGCTCCAACATCAGTTTCTGTAGAAAAGCCAGCAACTAGTGATGTGTCTGCGGTTGATCTCTTTGCAGATGCGGCATTTGTATCAGCACCACCACATGTGGACACAGGAGCTAGTTCTCAACCACAGGTTGAAGTGGATCTCTTTTCTTCACAACCAGCCATTCCTTCAGTTACACCGGCAGTTGACTTGTTTTCCATTCCTGCACCAGCTGTGCAGCCTGATAGCAAGTCGGACACCTCTGCTCCTGTGAACAACAGCACTTTTGATCCATTCGCTTCTGTTCCACTTAATAATTTTGACGGATCTGATGTTTTTGGTGATTTTACTTCTCAACCTGATTCTGTACCTTCACAGCCCTCAACTAATGTTATCGCCAATGGTAGTGCAAGTGCTAAATCCTTGGCAGAATCAAATGTTTCATCTAAAAAGGATGCTTTTCAGGTGAAGTCTGGCATTTGGGCTGATTCACTAAGCCGTGGATTGATTGACCTCAATATATCTGCTCCCAAAAAAGTATCCCTTGCAGATATTGGAATTGTGGGTGGATTGGATGATGGATCAGATGAAAGGGAGAAGGGCCCTCCAGCTACATTTTACATGGGGAGAGCCATGGGTTCAGGATCCGGTCTTAGTATGTATGGTGGCACTCCTTCACAGCAAACAACGGGAGACGacatattttcaaactttggcAGCCAAAACTATCAATTTGGTGGGTTCCAAAAGTAA 1653 0.4114 MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDDEPWGPHGTVLAEIATATKKFTECQLVMNVLWTRLSETGKDWRYVYKALAVIEYLVSHGSERAVDDIIEHTFQISALSSFEYVEPSGKDVGLNVRKKAENIVALLNDREKIHDIRNKAAANRDKYIGVSSSGMTYKSGTTSHSSSKYGGFGSSGDRFSDSYGDKGRYDEAKVDKDYSGKSRYGGSSYDEENSFKKGSARSVSKSNEKISSRTSKSSANASSVPSQSSNVPANNTEDDFDDFDPRGTSTKASAVSSNQVDLFGQDLIGDLMDAPTSVSVEKPATSDVSAVDLFADAAFVSAPPHVDTGASSQPQVEVDLFSSQPAIPSVTPAVDLFSIPAPAVQPDSKSDTSAPVNNSTFDPFASVPLNNFDGSDVFGDFTSQPDSVPSQPSTNVIANGSASAKSLAESNVSSKKDAFQVKSGIWADSLSRGLIDLNISAPKKVSLADIGIVGGLDDGSDEREKGPPATFYMGRAMGSGSGLSMYGGTPSQQTTGDDIFSNFGSQNYQFGGFQK 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00501 550 PANTHER EPSIN/ENT-RELATED 1 541 - -
Tsu01g00501 550 MobiDBLite consensus disorder prediction 221 271 - -
Tsu01g00501 550 MobiDBLite consensus disorder prediction 212 291 - -
Tsu01g00501 550 CDD ENTH 28 144 - -
Tsu01g00501 550 PANTHER CLATHRIN INTERACTOR EPSIN 1 1 541 IPR033521 GO:0006623|GO:0030276
Tsu01g00501 550 Pfam ENTH domain 27 147 IPR013809 -
Tsu01g00501 550 SUPERFAMILY ENTH/VHS domain 24 165 IPR008942 -
Tsu01g00501 550 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
Tsu01g00501 550 Gene3D - 19 165 IPR008942 -
Tsu01g00501 550 SMART enth_2 26 152 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00501 Tsu-Chr1 4389600 4396198 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00501 K12471 - gmx:100809198 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00501 01 4389600 4396198 Tsu01g00501 01 4389600 4396198 ECH