Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00499 ATGGCAGAAAGAATCTCTAGTGGAAGTTGGAGCAATGCTTCTAATATTTTGATGAATCATGACTTCTCTGATGGCCTGAACTATTGGTATCTCAATTGCTGCAATGGCCACGTAATTTCGACCGGTGCAGGTGATCAAGGTGGAATTTCGATGGGCTCGGATCAAAATTATGCTGTTATCACCAAACGAAACGAATGCTGGCAAGGTCTTGAGCAAGATGTCACAGACAGAATTTCCATTGGTTCCACTTACAGGGTTTCAGCTTTTGTTGGAGTATCTGGCCCTTCTCAGGAATCTGCTGAAGTAAAAGCTACACTGAAACTAGAATATGATGATTCAGCTACACAGTATTTGTTCATCGGAAGAACTTCAGTTATAAAGGGTAGCTGGGAAAAGTTGGAAGGAACATTTTCGCTGTCTACTATACCGAATCGGGCTGTATTTTATTTGGAAGGACCTGCTCCTGGAGTCACAAGCACAGAAGGATGTATTTCTACTGAAGATGAAAATATCATAATAAACCCTCAATTTGAGGATGGCCTGAATAATTGGTCGGGAAGAGCCTGCAAGATTGCGTTGAATGGTTCCATGGCAGATGGGAAAATTGTCCCAAAGTCTGGAGCCGTCTTTGCGTGCGCAGCAGAACGAACACAAGCCTGGAATGGAATTCAGCAGGAGATAACTGGACGCGTGAAGCGCAAGTTGGCCTATGAGCTCACTGCTTTAGTTCGGATATACGGCAACAATGTCACAAGTGCCGATATACGGGCTACTTTGTGGGTTCAAACACCAGATCTCCGGGAGCAGTATATAGGCATTGCAAATGTGCAGGCAACAGAAACAGATTGGGTGACGCTGCAGGGAAAATTCCTTCTGAATGGTTCCTCATCAAAAGTGGTCCTTTATTTAGAAGGCCCTCCACCTGGAACCAACATTCTTGTCAATACTTTGGTCGTAAAGCATGCTGCTAAAGCAATTCCTTCAACACCACTAGACATAAAGaatgcTGCTTTTGGAGTCAATATAATTGCGAACAGTAATCTGTCTGATGACACCAAAGGATGGTTTCCCCTTGGCAATTGTACTTTAACTGTTAAAACTGGTTCCCCTCATATAATTCCACCCATGGCAAGAGATTCTCTTGGACCTCACGAACTCCTAAGTGGTCGCTACATACTTGTAACAAATAGAACACAAACTTGGAATGGTCCTGCTCAGGTGATCACAGAGAAATTGAAGCTATTTTTGACTTACCAAGTATCTGCTTGGGTTAGGATTGGTTCTGGTTCAAATGGGCCTCAGAATGTGAATGTTGCCATTGGTGCTGACAACCAGTGGATCAATGGAGGACAAACTGAGATTTCGGATGACAGGTGGCATGAAATTGGTGGATCGTTCAGAATTGAGAAGCAGCCATCAAAGGTTATGGTTTATATTCAAGGTCCTGCTTCTGGTGTGGACTTGATGGTGTCTGGACTTCAGATTTTCGCTGTTGACAGACGTGCAAGGTTTAGATATTTGAAGATGCAAACAGACAAGATTCGGAAGCGTGATGTTGTACTAAAATTCTCTGGGCTAGACTCTAACAGCTACCTTAACACCACGGTGCAAGTTAGACAAACACAGAACGATTTCCCGATTGGAACATGCATCAGCAGATCAAACATTGACAATGAAGATTTTGTTAACTTCCTTGTGAAACACTTCAACTGGGCTGTATTTGGAAATGAGTTGAAGTGGTATTGGACTGAGCCACAACAAGGGAATTTGAATTACAAGGACGCTGATGATTTGTTAAGCCTGTGTCAAAAGTACAAGATCCAAACTCGTGGACACTGCATCTTCTGGGAAGTGGACGAAACTGTTCAGCAATGGATTAAGTCACtgaataaaaatgatttgatgACGGCTGTTCAAAACCGTTTAACCGGTCTTCTGACTCGCTACAAGGGTAAGTTCAATCACTATGATGTTAACAATGAAATGCTGCATGGTTCATTTTACCAAGATAGGTTAGGCAAAGATATAAGGGCAAACATGTTCAAGACTGCAAACCAACTAGACTCATCGGCTACATTGTTTGTGAATGATTATCATATTGAAGATGGATGCGACACAAGATCATGTCCAGATAAATACATTCAACATATCCTTGATTTGCAAGAACAAGGTGCACCGGTTGGTGGAATTGGAATTCAAGGTCACATAAATAGTCCAATTGGGCCTATTGTTTGTTCTTCGCTTGATAAATTAGGTATTCTTGGTTTACCTATATGGTTTACGGAACTTGATGTGTCTTCTATGAATGAATATGTGAGAGCTGATGATTTTGAAGTTATGCTTAGAGAAGCTTTGGCTCACCCTGCTGTTGAAGGGATAATGCTGTGGGGATTTTGGGAGTTGTTTATGAGTAGAGACAATGCACATTTGGTGAATGCAGAAGGTGACATTAATGAAGCTGGAAAAAGGTTTCTAGCTTTGAAACAAGAGTGGCTATCTCATAGTCATGGTCATGTTGATGAGCAAGGTCATTTCAATTTCAGAGGGTTTTATGGAACTTATAATGTGGAAGTTGTGACACCATCAAAGAAAATTGCTAAGACATTTGTGCTTGATAAAGGCTCTCTCCCAGAGTGGGATAACTATGACCAAAATGAGGCTGTCTATTATCAAGAACATCTACAGTATATTGTAGGTATACTATTTGAAATTGTGTTCTGGCTCATAGTAGGGGCATTACTTATTCTTTTTGCAGCTACGGCATATTGTAGATTGATTTCTATCTTCGCAAGCTTTTATACTAGCATAAATGATGATGCCTTTATTTTGGATATCTTCCTCGGGCAACCTGATTTTTTCACTTCATTTCTTCTTTGCAAGGGATTTGGCGACACAAATAAGTTCCCTGTTACTGAGGGTGTACATATAATCATGAAGAGGTTCTTCACATGCTGTCTCTCAAAGTGTCACAATAAATCTCACTCTGATTCTGAGATAATGGCAGAAAGGATCCTTAGTGCAAGTTGGAGCAATGCTTCTAATATTTTGATGAATCATGACTTCTCTGATGGCCTGAACTATTGGTATCTCAATTGCTGCAATGGCTACGTAATTTCGGCCAGTGCGGGAGATCAAGGTGGAATTTCGATGGACTCAGATCAAAATTATGCTGTTATAACCGAACGAAACGAATGCTGGCAAGGTCTTGAGCAAGATATAACAGACAGAATTTCCATTGGTTCCTCTTACATGGTTTCAGCTTTTGTTGGAGTATCTGGCCCTTCTCAGGAATCTGCTGAAGTAAAAGCTACACTGAAACTAGAATATGATGATTCAGCTACACAATATTTGTTCATTGGAAGAACTTCAGTTATAAAAGCAGTGATCAATTGTTCCAGTCCAAATAACAAAAAGGCCACATGCACAGAAGGATGTGTTTCTACTGAAGAcgaaaacataataataaaccCTCAATTTGAGGATGGCCTGAATAATTGGTTTGAAAGATCCTGCAAGATTGTGTTGAATGATTCCATGGCAGATGGTAAAATTGTCCCAAAGTCTGGAAAATTCTTTGCATGCGCAGCAGAACGAACACAAGCCTGGAATGGAATTCAGCAGGAGATAACTGGACGCGTGCAGCGCAAGTTGGCCTATGAGTTGACTGCTTTAGTTCGGATATATGGCAACAATGTCACTAGTGCCGATGTACAGGCTACTTTGTGGGTTCAAACACCAGATCTCCGAGAGCAGTATATAGGCATTGCAAATGTGCAGGCAACAGATACAGACTGGGTGACGCTGCAGGGAAAATTCCTTCTAAATGGTTCCTTATCAAAAGTGGTCCTTTATCTAGAGGGCCCTCCACCTGGAACAGACATTCTTGTCAATACTTTGGTTGTAAAGCATGCTGCTAAAGCAACTCCTTCAACACCACTTAACATAGAGAATGTTGCTTTTGGAGTCAATATAATTGAGAACAGCAATCTGTTTGATGACACCAATGGATGGTTTACCCTTGGCAATTGTATTTTAACTGTTAAAACCGATTCGCCTCTTATAGTTCCACCTATGGCAAGAGAATCTCTTGGACGTCACGAACCCCTAAGTGGTCACTACATACTTGTAACGAATAGAGCACAAACATGGAATGGTCCTGCTCAGGTGATCACTGACAAATTGAAGCTATTTGTGACTTACCAAGTATCTGCTTGGGTTCGGATTGGTTCTGGTTCAAATAGGCAGCAGAATGTGAATGTTGCCATTAGTGCTGACAACCAGTGGATCAATGGAGGACAAACCGAGGTTTCAGATAGCAGGTGGCATGAAATGAATGGATCGTTCAGAATCGAGAAGCAGCCGGCAAAGGTTACGGTTTATATTCAAGGTCCTGCTTCTGGTGTGGACTTGATGGTTGCTGGACTTCACATTTTTGCGGTTGATAGACACAGAAGGTTTACATATTTGAAGATGCGAACAGACAAGTTTCGGAAGCGTGAAGTTACACTAAAATTCTCTGGGCTAGACTCTAGCAGCTACCCTAACACCACAGTGAACGTTACACAAACACGGAACAATTTCCCGATTGGAACATGCATCAGCAGATCAAACATTGACAATGAAGATTTTGTCAACTTCCTTGTGAAACACTTCAATTGGGCTGTATTTGGAAATGAGTTGAAGTGGGAAGTCACTGAGCCACAACAAGGGATATTGAATTACAAGGACGCTGATGATCTCTTAAGAATGTGTCAGAATTACAATATCCAAACTCGTGGAAACTGCATCTTCTGCGAAGTGGATGAAAGTGTTCAGCAATGGATTAAGTCAttgaataaaaaagatttgatgACGGCTGTTCAAAACCGTTTAACCGGTCTTCTGACTCGCTACAAGGGTGCGTTCAATCACTATGATGTTAACAATGAAATGCTGCATGGTTCATTTTACCAAGATAGGTTAGGCAAAGATATAAGGGCAGACATGTTCAAGACTGCATACCAACTAGACTCGTCTGCTACATTGTTTGTGAATGATTATCATATTGAAGATGGATGCGACACAAGGTCATGTCCAGAGAAATACATTCAACACATTCTGGATTTGCTAAAACAAGGTGCACCAGTCGGGGGAATAGGAATTCAAGGTCATATAAATAGTCCAATTGGGCCTCTTGTTCGTTCTTCACTCGATAAATTAGGTGTTTTCTGTTTACCTATATGGTTTACAGAACTGGACGTGTCTTCCAGGAATGAGTATGTAAGAGCAGATGACCTTGAAGTTATGCTTAGAGAAGCCTTTGCTCACCCTGCCGTTGAAGGAATAATGCTGTGGGGATTTTGGGAGCTGCTTATGAGTAGGGACAATGCACATTTGGTGAATGCCGAAGGTGAGATTAATGAAGCTGGAAAAAGGTTTCTAGCATTAAAGCAAGAGTGGCTATCTCATACTCAAGGTCACATTGATAAGGAAGGTCTATTCAAATTCAGAGGGTTTTCTGGAACTTATGATCTGGAAATTGTGACACCATCAAAAACAATTGTCACGTCATTTGTGCTTGATAAAGGTAGCGATCCAGAGATGGTTTCCattaatttataa 5601 0.4094 MAERISSGSWSNASNILMNHDFSDGLNYWYLNCCNGHVISTGAGDQGGISMGSDQNYAVITKRNECWQGLEQDVTDRISIGSTYRVSAFVGVSGPSQESAEVKATLKLEYDDSATQYLFIGRTSVIKGSWEKLEGTFSLSTIPNRAVFYLEGPAPGVTSTEGCISTEDENIIINPQFEDGLNNWSGRACKIALNGSMADGKIVPKSGAVFACAAERTQAWNGIQQEITGRVKRKLAYELTALVRIYGNNVTSADIRATLWVQTPDLREQYIGIANVQATETDWVTLQGKFLLNGSSSKVVLYLEGPPPGTNILVNTLVVKHAAKAIPSTPLDIKNAAFGVNIIANSNLSDDTKGWFPLGNCTLTVKTGSPHIIPPMARDSLGPHELLSGRYILVTNRTQTWNGPAQVITEKLKLFLTYQVSAWVRIGSGSNGPQNVNVAIGADNQWINGGQTEISDDRWHEIGGSFRIEKQPSKVMVYIQGPASGVDLMVSGLQIFAVDRRARFRYLKMQTDKIRKRDVVLKFSGLDSNSYLNTTVQVRQTQNDFPIGTCISRSNIDNEDFVNFLVKHFNWAVFGNELKWYWTEPQQGNLNYKDADDLLSLCQKYKIQTRGHCIFWEVDETVQQWIKSLNKNDLMTAVQNRLTGLLTRYKGKFNHYDVNNEMLHGSFYQDRLGKDIRANMFKTANQLDSSATLFVNDYHIEDGCDTRSCPDKYIQHILDLQEQGAPVGGIGIQGHINSPIGPIVCSSLDKLGILGLPIWFTELDVSSMNEYVRADDFEVMLREALAHPAVEGIMLWGFWELFMSRDNAHLVNAEGDINEAGKRFLALKQEWLSHSHGHVDEQGHFNFRGFYGTYNVEVVTPSKKIAKTFVLDKGSLPEWDNYDQNEAVYYQEHLQYIVGILFEIVFWLIVGALLILFAATAYCRLISIFASFYTSINDDAFILDIFLGQPDFFTSFLLCKGFGDTNKFPVTEGVHIIMKRFFTCCLSKCHNKSHSDSEIMAERILSASWSNASNILMNHDFSDGLNYWYLNCCNGYVISASAGDQGGISMDSDQNYAVITERNECWQGLEQDITDRISIGSSYMVSAFVGVSGPSQESAEVKATLKLEYDDSATQYLFIGRTSVIKAVINCSSPNNKKATCTEGCVSTEDENIIINPQFEDGLNNWFERSCKIVLNDSMADGKIVPKSGKFFACAAERTQAWNGIQQEITGRVQRKLAYELTALVRIYGNNVTSADVQATLWVQTPDLREQYIGIANVQATDTDWVTLQGKFLLNGSLSKVVLYLEGPPPGTDILVNTLVVKHAAKATPSTPLNIENVAFGVNIIENSNLFDDTNGWFTLGNCILTVKTDSPLIVPPMARESLGRHEPLSGHYILVTNRAQTWNGPAQVITDKLKLFVTYQVSAWVRIGSGSNRQQNVNVAISADNQWINGGQTEVSDSRWHEMNGSFRIEKQPAKVTVYIQGPASGVDLMVAGLHIFAVDRHRRFTYLKMRTDKFRKREVTLKFSGLDSSSYPNTTVNVTQTRNNFPIGTCISRSNIDNEDFVNFLVKHFNWAVFGNELKWEVTEPQQGILNYKDADDLLRMCQNYNIQTRGNCIFCEVDESVQQWIKSLNKKDLMTAVQNRLTGLLTRYKGAFNHYDVNNEMLHGSFYQDRLGKDIRADMFKTAYQLDSSATLFVNDYHIEDGCDTRSCPEKYIQHILDLLKQGAPVGGIGIQGHINSPIGPLVRSSLDKLGVFCLPIWFTELDVSSRNEYVRADDLEVMLREAFAHPAVEGIMLWGFWELLMSRDNAHLVNAEGEINEAGKRFLALKQEWLSHTQGHIDKEGLFKFRGFSGTYDLEIVTPSKTIVTSFVLDKGSDPEMVSINL 1866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00499 1866 Gene3D Glycosidases 1513 1822 - -
Tsu01g00499 1866 Gene3D Glycosidases 531 840 - -
Tsu01g00499 1866 PANTHER - 1140 1866 - -
Tsu01g00499 1866 SUPERFAMILY Galactose-binding domain-like 339 499 IPR008979 -
Tsu01g00499 1866 SUPERFAMILY Galactose-binding domain-like 1150 1304 IPR008979 -
Tsu01g00499 1866 PANTHER - 17 157 - -
Tsu01g00499 1866 SUPERFAMILY Galactose-binding domain-like 168 322 IPR008979 -
Tsu01g00499 1866 PANTHER GLYCOSYL HYDROLASE 1003 1121 IPR044846 GO:0004553|GO:0005975
Tsu01g00499 1866 SUPERFAMILY (Trans)glycosidases 1513 1816 IPR017853 -
Tsu01g00499 1866 PANTHER - 163 878 - -
Tsu01g00499 1866 PANTHER - 1003 1121 - -
Tsu01g00499 1866 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 532 827 IPR001000 GO:0004553|GO:0005975
Tsu01g00499 1866 SUPERFAMILY Galactose-binding domain-like 1321 1481 IPR008979 -
Tsu01g00499 1866 SMART glyco_10 578 828 IPR001000 GO:0004553|GO:0005975
Tsu01g00499 1866 SUPERFAMILY (Trans)glycosidases 532 835 IPR017853 -
Tsu01g00499 1866 Gene3D - 9 162 - -
Tsu01g00499 1866 Gene3D - 1007 1128 - -
Tsu01g00499 1866 Gene3D - 335 497 - -
Tsu01g00499 1866 Gene3D - 1319 1478 - -
Tsu01g00499 1866 Gene3D - 1145 1304 - -
Tsu01g00499 1866 Gene3D - 163 322 - -
Tsu01g00499 1866 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 1514 1809 IPR001000 GO:0004553|GO:0005975
Tsu01g00499 1866 PANTHER GLYCOSYL HYDROLASE 17 157 IPR044846 GO:0004553|GO:0005975
Tsu01g00499 1866 PANTHER GLYCOSYL HYDROLASE 1140 1866 IPR044846 GO:0004553|GO:0005975
Tsu01g00499 1866 Pfam Carbohydrate binding domain 14 155 IPR003305 GO:0016798
Tsu01g00499 1866 Pfam Carbohydrate binding domain 341 484 IPR003305 GO:0016798
Tsu01g00499 1866 Pfam Carbohydrate binding domain 1323 1466 IPR003305 GO:0016798
Tsu01g00499 1866 Pfam Carbohydrate binding domain 1013 1122 IPR003305 GO:0016798
Tsu01g00499 1866 Pfam Carbohydrate binding domain 170 306 IPR003305 GO:0016798
Tsu01g00499 1866 Pfam Carbohydrate binding domain 1152 1288 IPR003305 GO:0016798
Tsu01g00499 1866 SUPERFAMILY Galactose-binding domain-like 1014 1126 IPR008979 -
Tsu01g00499 1866 PANTHER GLYCOSYL HYDROLASE 163 878 IPR044846 GO:0004553|GO:0005975
Tsu01g00499 1866 SUPERFAMILY Galactose-binding domain-like 15 157 IPR008979 -
Tsu01g00499 1866 Coils Coil 1792 1812 - -
Tsu01g00499 1866 Pfam Glycosyl hydrolase family 10 541 798 IPR001000 GO:0004553|GO:0005975
Tsu01g00499 1866 Pfam Glycosyl hydrolase family 10 1523 1780 IPR001000 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00499 Tsu-Chr1 4357152 4370070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00499 11 873 Glycoside Hydrolase AT1G58370 68.146 0.0 1278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00499 - - gmx:100818319 1516.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00499 01 4357152 4370070 Tsu01g00499 01 4357152 4370070 ECH